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The map label for this gene is vexP1 [H]

Identifier: 126699485

GI number: 126699485

Start: 2174330

End: 2175607

Strand: Direct

Name: vexP1 [H]

Synonym: CD1873

Alternate gene names: 126699485

Gene position: 2174330-2175607 (Clockwise)

Preceding gene: 126699484

Following gene: 126699486

Centisome position: 50.68

GC content: 24.02

Gene sequence:

>1278_bases
GTGATAAAAAATGCTATAGCATATATTACAAGAAAGAGAAATAGAACTTTAATAATTTTTATCATATTAACTATAGTTCT
TTCTTGCTTGTATTCTTGTTTAACAATAATGAAATCAAGCAATGAAATAGAAAAGGCTTTATATGAAAGTTCTAATTCTT
CAATATCAATAACAAAAAAAGATGGTAAATATTTTAATGTTAATCAATTTAAAGATATTGAAAAATTAAAAGAAATTGAA
GAAAAAATAATTCAATATGATGGATTAGCAAAACTAAAAGATGCTAAAGTAGTTAGCGGAGAACAAAGAATAAATAGAGA
AGATTTATCTGACGAATTTAAGAATGTTGTTTCACTCGAAGCTACAAATAATACTAAAAGAAATATTTTATTTAGTAGTG
GAGTATTTACAATTAAAGAAGGTAAAAATATAGGAGAAAATGATAAGAATTCAATTATTGTTCATGAAGAATTTGCTAAA
CAAAACAATCTAAAATTAGGTGATGAAGTTGATCTTGAATTACTAGATATTGAAAAAAGTGGAAAAATAAAAAGTCATAA
ATTTAAAATTATAGGGATCTTTTCTGGTAAAAAACAGGAAACATATACAGGATTATCTTCTGATTTTAGTGAAAATATGG
TGTTTGTAGATTATTCAACAAGCCAAGAGATATTAAATAAATCAGAAAATAATAAAATCGCAAATAAAATTTTAATGTAT
TCTGGTAGTGCAGAATCTACAGACTTAGCCTTAAACAAATTGAAAGAGCTTAAAATTGATGAGTCAAAGTATTTTGTTGA
AAAAGATTCTAATGCGTTTGAAGAGTCTTTAGAGTCAGTGAGTGGAATAAAACATATAATAAAAATAATGACTTATTCTA
TTATGTTAGGTGGGATGGTTGTTCTTTCATTAATCTTGATTCTATGGTTAAGAGAAAGAATTTATGAAATAGGTATATTT
TTATCTATTGGAACATCTAAGATACAAATTATAATGCAATTTATATTCGAGTTAATATTCATATCGATACCAAGTATAAT
ATCTTCCTTATTTTTAGGAAATGTATTACTAAAAGTAATTGTAGATGGATTCATTAACTCAGAGGACTCAATGATTTCCG
GTGGAAGTTTAATAAATAATAGTAGTTTTATGTTAAATATAACAACACTTGGACAAAGTTATTTAATATTAATAAGTATT
ATTGTTTTATCAGTTGTATTTGCTTCTTCATTAATATTAATCAAGAAGCCTAAAGAAATATTATCAAAAATAAGTTAG

Upstream 100 bases:

>100_bases
CAATCATCTGGAGTGTATCAGATGTGGACGATGTAAAAATGCTTGTCCAGTGGATGCAATTAGTTATGGAGTAAGAAAAT
AGAGAGGAGTAGTTAGGAAA

Downstream 100 bases:

>100_bases
GAGAAAATAATGGATATATTAGAAATAAAGAATGTAGCATATAGTTATGCAAATTCTAAAGAAAAAGTTTTGTCAGGAGT
AAATCAAAAATTTGAACTTG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MIKNAIAYITRKRNRTLIIFIILTIVLSCLYSCLTIMKSSNEIEKALYESSNSSISITKKDGKYFNVNQFKDIEKLKEIE
EKIIQYDGLAKLKDAKVVSGEQRINREDLSDEFKNVVSLEATNNTKRNILFSSGVFTIKEGKNIGENDKNSIIVHEEFAK
QNNLKLGDEVDLELLDIEKSGKIKSHKFKIIGIFSGKKQETYTGLSSDFSENMVFVDYSTSQEILNKSENNKIANKILMY
SGSAESTDLALNKLKELKIDESKYFVEKDSNAFEESLESVSGIKHIIKIMTYSIMLGGMVVLSLILILWLRERIYEIGIF
LSIGTSKIQIIMQFIFELIFISIPSIISSLFLGNVLLKVIVDGFINSEDSMISGGSLINNSSFMLNITTLGQSYLILISI
IVLSVVFASSLILIKKPKEILSKIS

Sequences:

>Translated_425_residues
MIKNAIAYITRKRNRTLIIFIILTIVLSCLYSCLTIMKSSNEIEKALYESSNSSISITKKDGKYFNVNQFKDIEKLKEIE
EKIIQYDGLAKLKDAKVVSGEQRINREDLSDEFKNVVSLEATNNTKRNILFSSGVFTIKEGKNIGENDKNSIIVHEEFAK
QNNLKLGDEVDLELLDIEKSGKIKSHKFKIIGIFSGKKQETYTGLSSDFSENMVFVDYSTSQEILNKSENNKIANKILMY
SGSAESTDLALNKLKELKIDESKYFVEKDSNAFEESLESVSGIKHIIKIMTYSIMLGGMVVLSLILILWLRERIYEIGIF
LSIGTSKIQIIMQFIFELIFISIPSIISSLFLGNVLLKVIVDGFINSEDSMISGGSLINNSSFMLNITTLGQSYLILISI
IVLSVVFASSLILIKKPKEILSKIS
>Mature_425_residues
MIKNAIAYITRKRNRTLIIFIILTIVLSCLYSCLTIMKSSNEIEKALYESSNSSISITKKDGKYFNVNQFKDIEKLKEIE
EKIIQYDGLAKLKDAKVVSGEQRINREDLSDEFKNVVSLEATNNTKRNILFSSGVFTIKEGKNIGENDKNSIIVHEEFAK
QNNLKLGDEVDLELLDIEKSGKIKSHKFKIIGIFSGKKQETYTGLSSDFSENMVFVDYSTSQEILNKSENNKIANKILMY
SGSAESTDLALNKLKELKIDESKYFVEKDSNAFEESLESVSGIKHIIKIMTYSIMLGGMVVLSLILILWLRERIYEIGIF
LSIGTSKIQIIMQFIFELIFISIPSIISSLFLGNVLLKVIVDGFINSEDSMISGGSLINNSSFMLNITTLGQSYLILISI
IVLSVVFASSLILIKKPKEILSKIS

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 47832; Mature: 47832

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNAIAYITRKRNRTLIIFIILTIVLSCLYSCLTIMKSSNEIEKALYESSNSSISITKK
CCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEC
DGKYFNVNQFKDIEKLKEIEEKIIQYDGLAKLKDAKVVSGEQRINREDLSDEFKNVVSLE
CCCEECCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEECCHHHCCHHHHHHHHHHHEEEE
ATNNTKRNILFSSGVFTIKEGKNIGENDKNSIIVHEEFAKQNNLKLGDEVDLELLDIEKS
ECCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCEEEEEECCC
GKIKSHKFKIIGIFSGKKQETYTGLSSDFSENMVFVDYSTSQEILNKSENNKIANKILMY
CCEECCEEEEEEEECCCCCHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCHHHHEEEEE
SGSAESTDLALNKLKELKIDESKYFVEKDSNAFEESLESVSGIKHIIKIMTYSIMLGGMV
CCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSLILILWLRERIYEIGIFLSIGTSKIQIIMQFIFELIFISIPSIISSLFLGNVLLKVI
HHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDGFINSEDSMISGGSLINNSSFMLNITTLGQSYLILISIIVLSVVFASSLILIKKPKEI
HHHHCCCCCCEECCCCEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCHHH
LSKIS
HHHCC
>Mature Secondary Structure
MIKNAIAYITRKRNRTLIIFIILTIVLSCLYSCLTIMKSSNEIEKALYESSNSSISITKK
CCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEC
DGKYFNVNQFKDIEKLKEIEEKIIQYDGLAKLKDAKVVSGEQRINREDLSDEFKNVVSLE
CCCEECCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEECCHHHCCHHHHHHHHHHHEEEE
ATNNTKRNILFSSGVFTIKEGKNIGENDKNSIIVHEEFAKQNNLKLGDEVDLELLDIEKS
ECCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCEEEEEECCC
GKIKSHKFKIIGIFSGKKQETYTGLSSDFSENMVFVDYSTSQEILNKSENNKIANKILMY
CCEECCEEEEEEEECCCCCHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCHHHHEEEEE
SGSAESTDLALNKLKELKIDESKYFVEKDSNAFEESLESVSGIKHIIKIMTYSIMLGGMV
CCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSLILILWLRERIYEIGIFLSIGTSKIQIIMQFIFELIFISIPSIISSLFLGNVLLKVI
HHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDGFINSEDSMISGGSLINNSSFMLNITTLGQSYLILISIIVLSVVFASSLILIKKPKEI
HHHHCCCCCCEECCCCEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCHHH
LSKIS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]