Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699479

Identifier: 126699479

GI number: 126699479

Start: 2169244

End: 2170050

Strand: Direct

Name: 126699479

Synonym: CD1868

Alternate gene names: NA

Gene position: 2169244-2170050 (Clockwise)

Preceding gene: 126699478

Following gene: 126699482

Centisome position: 50.56

GC content: 30.11

Gene sequence:

>807_bases
ATGGAGATTAGTAAAAAAGAACTTAGAAAAATCAGTAGAAAATTTAGGACATTAGCTTCAAATGTTATGAATTCATATTA
TGGAGAACAGAATGCAAATTTGGAAGAAATGATAAATTATATAGAGCAAACATCGTTGATAAAAGAGTATTTGCATAGTT
TAGAATATGATGTTGATGGCTTAGATGACTTATTAAATACGATAAGTAATTCTTATGGACGTAAAGTTTTGAATCTTGGC
AATGATAGTAATAAAAGGACGTATCTACTGTATAGAGCATTTTCCTTTATAACAGGAAATAATCTACCTACATATACTTT
TGGCTGGTATTATGCTGGCAGTAATAAATATCAAGATATGGCAAAGGCGTTTGGCGATAGAATGGTCTATCCGTTTGTAC
TTGAGGTTGAAAATTATATGAAAGATATTTCTACCGATATGGGGTACGATGAAAATAATGCTCTATATAATATCAATGTT
AATAGTTCTGGAGTTCAAGTCAATATTGCGGAACACGGAAGCACGATTAACGCTGACCAAGAAAATAAATTTAATACTGA
AGAAGTAATCAAGGCAATTAACAGTGTAGAAGACTTAATTAAAGGTATGGAGGATGATAACTCCAAATCAATACTTAATC
AGAATTTAGATAATATAAAAAATGAAATTAAGCAGAAGCATCCGAAGAAAGAAGTATTGACTACTTGTTTAAAAAGTATG
CATTTTATCACTACTTCCGTAGCTTTAATTCCTGATTTAGCTTTAGGTATAAAAATGCTTGCATCATTGATAGGCATTTC
AATTTAA

Upstream 100 bases:

>100_bases
TATGAAGAAAAGAAATATTTGTGTTGTGGCAAAACCGCTAGAATAAGTAGTATAAAAAAATTAGAAGGTAGTTATTGCCC
GTTTTGTGGAGAGATGATAG

Downstream 100 bases:

>100_bases
TATTATAAAAATAAGAAAGCTATATAATATTAGAGTTATCGTTCCATCTCCTTACCCATGTAAATTCCATAGTTCTTTCG
TATTTGATAAAGCTCGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDGLDDLLNTISNSYGRKVLNLG
NDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDMAKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINV
NSSGVQVNIAEHGSTINADQENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM
HFITTSVALIPDLALGIKMLASLIGISI

Sequences:

>Translated_268_residues
MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDGLDDLLNTISNSYGRKVLNLG
NDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDMAKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINV
NSSGVQVNIAEHGSTINADQENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM
HFITTSVALIPDLALGIKMLASLIGISI
>Mature_268_residues
MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDGLDDLLNTISNSYGRKVLNLG
NDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDMAKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINV
NSSGVQVNIAEHGSTINADQENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM
HFITTSVALIPDLALGIKMLASLIGISI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30518; Mature: 30518

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDDLLNTISNSYGRKVLNLGNDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDM
HHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
AKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINVNSSGVQVNIAEHGSTINADQ
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCC
ENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
HFITTSVALIPDLALGIKMLASLIGISI
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDDLLNTISNSYGRKVLNLGNDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDM
HHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
AKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINVNSSGVQVNIAEHGSTINADQ
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCC
ENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
HFITTSVALIPDLALGIKMLASLIGISI
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA