Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is corA [H]

Identifier: 126699439

GI number: 126699439

Start: 2119819

End: 2120796

Strand: Direct

Name: corA [H]

Synonym: CD1831

Alternate gene names: 126699439

Gene position: 2119819-2120796 (Clockwise)

Preceding gene: 126699438

Following gene: 126699440

Centisome position: 49.41

GC content: 24.03

Gene sequence:

>978_bases
TTGAAATTTAGGAGTAGATGTATGTATATACTGAATTTAAATACAAGAGAGACTATTGAAGATTTTAGAGATAAATTTTA
TGTAGCAGAAAATTCTTATCTTATATTAAGTGCTCCAAAAAATTTAAAATTGCTTAAGGAAACTTTGGATATAGATGAAA
TAACTTTTAATGATTGTCTTAAATTTGATGAAATAACCAAACTTGATTTATTTGATAATTACGATTTTTTAAGCCTAAAT
ACATTTGAACTAAGAGATGGAGAAGCTGTTATAGAAGAGGTAAATATGTATTTATCAGATAATTTTATATTGGTTGTAGT
GAATGAAGAACACTTTTTATTTGAATTTGTAAAAAATATTATTTTGAAGAACTCTCAACTTGAAAAAAATCCAGTTATTA
ATCTATTTAAGATAAACTACTTGATTCTTAGAGAAGTTATAAAAAATGGTTTTGAGTCTTTGGAAAAAGTTGAAGAGTTA
ATTCTTCAAATAGAAGATGAAATGATGGACAACATTAATAAGAATCATGTATCTAGAATAAGTGATGTAAGAGGATTAAC
AAGAATTATAGTTAAGAATACTAGACCTCTTTTGTATATTGGGGATAGAATAGTTAAGGAAAATATAAGATATTTAAAAT
ATTCAAATGTAAAAAAATATAATTTAGAAAATTTTCAAGGCATAGATTTTGGAATTGACAAATTATACAATTTCGCATTG
TCAACACGAGAGTTAGCAGATAAATTATTAGATATTTATTCTTCCAGAGTAGGTGAGAAAACAAATAACTTAATTACAAA
ATTAACCTTGTTAACAGCCATATCAGCACCACTTACAATTATAACTGGTATATATGGAATGAACTTTAGATATATGCCAG
AATTAAACTGGATTTATGGATATCCAGCAACTTTATTTTTTATGCTATGTATAATTTTTGTTGGAATTATAATATTTAAA
ATAAAAAAATTATTGTAA

Upstream 100 bases:

>100_bases
ACTTACCTTATAATAAATTTAATATAAATATTAAATAATAATTATTAAAATAGTGTAAAATAATTACAGTAATGATTATA
AAAAAATTTTAGAATGTAAA

Downstream 100 bases:

>100_bases
ATTACAGATGATGTTTAATTGATTTTATAAAAATACATCAATTGAGAAGCTGATTTAAGTAAATAAAAAAATATTTTAAA
TTGAAAATATTTATAGAAAA

Product: cation transport-related membrane protein

Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCLKFDEITKLDLFDNYDFLSLN
TFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNIILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEEL
ILQIEDEMMDNINKNHVSRISDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL
STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYGYPATLFFMLCIIFVGIIIFK
IKKLL

Sequences:

>Translated_325_residues
MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCLKFDEITKLDLFDNYDFLSLN
TFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNIILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEEL
ILQIEDEMMDNINKNHVSRISDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL
STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYGYPATLFFMLCIIFVGIIIFK
IKKLL
>Mature_325_residues
MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCLKFDEITKLDLFDNYDFLSLN
TFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNIILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEEL
ILQIEDEMMDNINKNHVSRISDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL
STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYGYPATLFFMLCIIFVGIIIFK
IKKLL

Specific function: Mediates influx of magnesium ions [H]

COG id: COG0598

COG function: function code P; Mg2+ and Co2+ transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004488
- InterPro:   IPR002523 [H]

Pfam domain/function: PF01544 CorA [H]

EC number: NA

Molecular weight: Translated: 38292; Mature: 38292

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCL
CCCHHCEEEEEECCCHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHCCCCCCCHHHHH
KFDEITKLDLFDNYDFLSLNTFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNI
CCCCCCEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH
ILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEELILQIEDEMMDNINKNHVSRI
HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL
HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEECCCCEECCCCCCCCCHHHHHHHHHHH
STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCEEEC
YPATLFFMLCIIFVGIIIFKIKKLL
CHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCL
CCCHHCEEEEEECCCHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHCCCCCCCHHHHH
KFDEITKLDLFDNYDFLSLNTFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNI
CCCCCCEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH
ILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEELILQIEDEMMDNINKNHVSRI
HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL
HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEECCCCEECCCCCCCCCHHHHHHHHHHH
STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCEEEC
YPATLFFMLCIIFVGIIIFKIKKLL
CHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]

Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]