| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is corA [H]
Identifier: 126699439
GI number: 126699439
Start: 2119819
End: 2120796
Strand: Direct
Name: corA [H]
Synonym: CD1831
Alternate gene names: 126699439
Gene position: 2119819-2120796 (Clockwise)
Preceding gene: 126699438
Following gene: 126699440
Centisome position: 49.41
GC content: 24.03
Gene sequence:
>978_bases TTGAAATTTAGGAGTAGATGTATGTATATACTGAATTTAAATACAAGAGAGACTATTGAAGATTTTAGAGATAAATTTTA TGTAGCAGAAAATTCTTATCTTATATTAAGTGCTCCAAAAAATTTAAAATTGCTTAAGGAAACTTTGGATATAGATGAAA TAACTTTTAATGATTGTCTTAAATTTGATGAAATAACCAAACTTGATTTATTTGATAATTACGATTTTTTAAGCCTAAAT ACATTTGAACTAAGAGATGGAGAAGCTGTTATAGAAGAGGTAAATATGTATTTATCAGATAATTTTATATTGGTTGTAGT GAATGAAGAACACTTTTTATTTGAATTTGTAAAAAATATTATTTTGAAGAACTCTCAACTTGAAAAAAATCCAGTTATTA ATCTATTTAAGATAAACTACTTGATTCTTAGAGAAGTTATAAAAAATGGTTTTGAGTCTTTGGAAAAAGTTGAAGAGTTA ATTCTTCAAATAGAAGATGAAATGATGGACAACATTAATAAGAATCATGTATCTAGAATAAGTGATGTAAGAGGATTAAC AAGAATTATAGTTAAGAATACTAGACCTCTTTTGTATATTGGGGATAGAATAGTTAAGGAAAATATAAGATATTTAAAAT ATTCAAATGTAAAAAAATATAATTTAGAAAATTTTCAAGGCATAGATTTTGGAATTGACAAATTATACAATTTCGCATTG TCAACACGAGAGTTAGCAGATAAATTATTAGATATTTATTCTTCCAGAGTAGGTGAGAAAACAAATAACTTAATTACAAA ATTAACCTTGTTAACAGCCATATCAGCACCACTTACAATTATAACTGGTATATATGGAATGAACTTTAGATATATGCCAG AATTAAACTGGATTTATGGATATCCAGCAACTTTATTTTTTATGCTATGTATAATTTTTGTTGGAATTATAATATTTAAA ATAAAAAAATTATTGTAA
Upstream 100 bases:
>100_bases ACTTACCTTATAATAAATTTAATATAAATATTAAATAATAATTATTAAAATAGTGTAAAATAATTACAGTAATGATTATA AAAAAATTTTAGAATGTAAA
Downstream 100 bases:
>100_bases ATTACAGATGATGTTTAATTGATTTTATAAAAATACATCAATTGAGAAGCTGATTTAAGTAAATAAAAAAATATTTTAAA TTGAAAATATTTATAGAAAA
Product: cation transport-related membrane protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCLKFDEITKLDLFDNYDFLSLN TFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNIILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEEL ILQIEDEMMDNINKNHVSRISDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYGYPATLFFMLCIIFVGIIIFK IKKLL
Sequences:
>Translated_325_residues MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCLKFDEITKLDLFDNYDFLSLN TFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNIILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEEL ILQIEDEMMDNINKNHVSRISDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYGYPATLFFMLCIIFVGIIIFK IKKLL >Mature_325_residues MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCLKFDEITKLDLFDNYDFLSLN TFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNIILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEEL ILQIEDEMMDNINKNHVSRISDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYGYPATLFFMLCIIFVGIIIFK IKKLL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38292; Mature: 38292
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCL CCCHHCEEEEEECCCHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHCCCCCCCHHHHH KFDEITKLDLFDNYDFLSLNTFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNI CCCCCCEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH ILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEELILQIEDEMMDNINKNHVSRI HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEECCCCEECCCCCCCCCHHHHHHHHHHH STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCEEEC YPATLFFMLCIIFVGIIIFKIKKLL CHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKFRSRCMYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCL CCCHHCEEEEEECCCHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHCCCCCCCHHHHH KFDEITKLDLFDNYDFLSLNTFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNI CCCCCCEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH ILKNSQLEKNPVINLFKINYLILREVIKNGFESLEKVEELILQIEDEMMDNINKNHVSRI HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNVKKYNLENFQGIDFGIDKLYNFAL HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEECCCCEECCCCCCCCCHHHHHHHHHHH STRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGMNFRYMPELNWIYG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCEEEC YPATLFFMLCIIFVGIIIFKIKKLL CHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]