Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126699440

Identifier: 126699440

GI number: 126699440

Start: 2120973

End: 2121128

Strand: Direct

Name: 126699440

Synonym: CD1831A

Alternate gene names: NA

Gene position: 2120973-2121128 (Clockwise)

Preceding gene: 126699439

Following gene: 126699441

Centisome position: 49.44

GC content: 29.49

Gene sequence:

>156_bases
ATGAAAGGAATATTAAAAGAACTAACAGCAAAACTTTATAGCTTTTTTTACTTTATGTTCTGGGGCTTTTATTTTAGCGC
TGGCTATTTCTTTTACAAAAATATATGTACTTCCTTTCTGGTGAGGCCTTATTTTAGTGATTTTGAGCATAAGTAA

Upstream 100 bases:

>100_bases
TAAATTGAAAATATTTATAGAAAATATTGACAATTATATTTTCTTTGTTATAATTATTAAACAAGAAGAATAATAAATTA
TAAAAATGGAGGATAATACT

Downstream 100 bases:

>100_bases
ATTTTATAAAAATGATTATTTTATATATTTATATAAGATTTAGTGCTTGATAGATTATTTTAGAGAACTCATTAGTGAGT
TCTCTTTTTTATTTTAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MKGILKELTAKLYSFFYFMFWGFYFSAGYFFYKNICTSFLVRPYFSDFEHK

Sequences:

>Translated_51_residues
MKGILKELTAKLYSFFYFMFWGFYFSAGYFFYKNICTSFLVRPYFSDFEHK
>Mature_51_residues
MKGILKELTAKLYSFFYFMFWGFYFSAGYFFYKNICTSFLVRPYFSDFEHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6328; Mature: 6328

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGILKELTAKLYSFFYFMFWGFYFSAGYFFYKNICTSFLVRPYFSDFEHK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKGILKELTAKLYSFFYFMFWGFYFSAGYFFYKNICTSFLVRPYFSDFEHK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA