| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is scrK [H]
Identifier: 126699415
GI number: 126699415
Start: 2089154
End: 2090125
Strand: Direct
Name: scrK [H]
Synonym: CD1806
Alternate gene names: 126699415
Gene position: 2089154-2090125 (Clockwise)
Preceding gene: 126699414
Following gene: 126699417
Centisome position: 48.7
GC content: 28.19
Gene sequence:
>972_bases ATGAAAAAAGTAATTAGTATAGGAGAAGCTTTAATAGACTTTATACCTAATCAAAATGGTGGTAAATTAAAAAATGTATC AGAATTTAGAAGAGTAGCAGGAGGAGCTCCAGCAAATGTTAGTGCTGTTGTAGCAAAGCTTGGAGGAAAATCAAGTTTTA TATCTAAGTTAGGAAAAGATGCATTTGGTGATTATATAATAGATGTATTAAATGAAGTAAATGTAAATACTGATTATGTA TTGAGAACAAGTAAAGCAAATACAGGACTTGCTTTTGTATCATTAAAAGAAGATGGTAATCGTGATTTCTCATTTTATAG AAATCCAAGTGCAGATATGCTTTTAGAAGCTGATGAAGTTAAAAAAGAGTGGTTTAATAATTGTCATATCCTACATTTTT GTTCAGTAGATTTAATAGATAGTCCAATGAAATTAGCACATAAAAAAGCAATAGAATACGCACTTGAAAGTAATAGTATA ATAAGCTTTGACCCTAATATAAGATTACCTTTATGGGATAGTGAGCAATCTTGTAAAAAGGCAATATCAGAATTTTTACC TTTTGCTCATATTGTTAAGATATCTGATGAAGAATTAGAATTTATAACAGGAGAAAATGATATAGAAAAATCATTACATA AACTCTTTGTGGGGAATGTTGAACTAGTATTATATACAAAAGGAAAAGATGGAGTAGATGCATACACTAAAAAAGTAAAA GGTATGTGTAAAGGGGTTAAAGTAAATGCAATAGATACAACCGGAGCAGGAGATTCTTATATAGGTTCATTTTTATACAC CTTATTGTATAAACAAATAACATTGAATGATATAAAAGAAATGAAACAAGAAACGTTAAATGAGTATTTAGAATTTTCTA ATTATTATGCAGCTCGTAGTACAACTATTAAAGGTGCGATAAGTTCATATGCAACAAAGGAAGAAATAACTGAATTTATA AAAAATTTATAG
Upstream 100 bases:
>100_bases ATAAGGGTTTATAGTGATAAAATAGTAGAGTATGAGTATACTAAATTTAAATTAAAGCAAGGTATTGAATTATAAAAACA CATTATAAGGGGTAGAAAAG
Downstream 100 bases:
>100_bases TAGGAATGAGTAATAGGTTTTGAAGGAAGTAACATGTAAAGAGTTTTTAAGGATGTTTACTATGAAAATAGCAATAAAGA GGCTGTCTCAAAATAGAGAT
Product: fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKKVISIGEALIDFIPNQNGGKLKNVSEFRRVAGGAPANVSAVVAKLGGKSSFISKLGKDAFGDYIIDVLNEVNVNTDYV LRTSKANTGLAFVSLKEDGNRDFSFYRNPSADMLLEADEVKKEWFNNCHILHFCSVDLIDSPMKLAHKKAIEYALESNSI ISFDPNIRLPLWDSEQSCKKAISEFLPFAHIVKISDEELEFITGENDIEKSLHKLFVGNVELVLYTKGKDGVDAYTKKVK GMCKGVKVNAIDTTGAGDSYIGSFLYTLLYKQITLNDIKEMKQETLNEYLEFSNYYAARSTTIKGAISSYATKEEITEFI KNL
Sequences:
>Translated_323_residues MKKVISIGEALIDFIPNQNGGKLKNVSEFRRVAGGAPANVSAVVAKLGGKSSFISKLGKDAFGDYIIDVLNEVNVNTDYV LRTSKANTGLAFVSLKEDGNRDFSFYRNPSADMLLEADEVKKEWFNNCHILHFCSVDLIDSPMKLAHKKAIEYALESNSI ISFDPNIRLPLWDSEQSCKKAISEFLPFAHIVKISDEELEFITGENDIEKSLHKLFVGNVELVLYTKGKDGVDAYTKKVK GMCKGVKVNAIDTTGAGDSYIGSFLYTLLYKQITLNDIKEMKQETLNEYLEFSNYYAARSTTIKGAISSYATKEEITEFI KNL >Mature_323_residues MKKVISIGEALIDFIPNQNGGKLKNVSEFRRVAGGAPANVSAVVAKLGGKSSFISKLGKDAFGDYIIDVLNEVNVNTDYV LRTSKANTGLAFVSLKEDGNRDFSFYRNPSADMLLEADEVKKEWFNNCHILHFCSVDLIDSPMKLAHKKAIEYALESNSI ISFDPNIRLPLWDSEQSCKKAISEFLPFAHIVKISDEELEFITGENDIEKSLHKLFVGNVELVLYTKGKDGVDAYTKKVK GMCKGVKVNAIDTTGAGDSYIGSFLYTLLYKQITLNDIKEMKQETLNEYLEFSNYYAARSTTIKGAISSYATKEEITEFI KNL
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI11545855, Length=293, Percent_Identity=24.9146757679181, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI87081971, Length=334, Percent_Identity=26.3473053892216, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082281, Length=287, Percent_Identity=24.390243902439, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1790193, Length=292, Percent_Identity=24.6575342465753, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082343, Length=327, Percent_Identity=24.7706422018349, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17532905, Length=303, Percent_Identity=26.4026402640264, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 35999; Mature: 35999
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVISIGEALIDFIPNQNGGKLKNVSEFRRVAGGAPANVSAVVAKLGGKSSFISKLGKD CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCHH AFGDYIIDVLNEVNVNTDYVLRTSKANTGLAFVSLKEDGNRDFSFYRNPSADMLLEADEV HHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEECCCHHHEEEHHHH KKEWFNNCHILHFCSVDLIDSPMKLAHKKAIEYALESNSIISFDPNIRLPLWDSEQSCKK HHHHHCCCEEEEEECHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHH AISEFLPFAHIVKISDEELEFITGENDIEKSLHKLFVGNVELVLYTKGKDGVDAYTKKVK HHHHHCCHHHEEEECCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHH GMCKGVKVNAIDTTGAGDSYIGSFLYTLLYKQITLNDIKEMKQETLNEYLEFSNYYAARS HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTIKGAISSYATKEEITEFIKNL HHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MKKVISIGEALIDFIPNQNGGKLKNVSEFRRVAGGAPANVSAVVAKLGGKSSFISKLGKD CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCHH AFGDYIIDVLNEVNVNTDYVLRTSKANTGLAFVSLKEDGNRDFSFYRNPSADMLLEADEV HHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEECCCHHHEEEHHHH KKEWFNNCHILHFCSVDLIDSPMKLAHKKAIEYALESNSIISFDPNIRLPLWDSEQSCKK HHHHHCCCEEEEEECHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHH AISEFLPFAHIVKISDEELEFITGENDIEKSLHKLFVGNVELVLYTKGKDGVDAYTKKVK HHHHHCCHHHEEEECCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHH GMCKGVKVNAIDTTGAGDSYIGSFLYTLLYKQITLNDIKEMKQETLNEYLEFSNYYAARS HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTIKGAISSYATKEEITEFIKNL HHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]