| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is sacA [H]
Identifier: 126699414
GI number: 126699414
Start: 2087647
End: 2089128
Strand: Direct
Name: sacA [H]
Synonym: CD1805
Alternate gene names: 126699414
Gene position: 2087647-2089128 (Clockwise)
Preceding gene: 126699413
Following gene: 126699415
Centisome position: 48.66
GC content: 26.11
Gene sequence:
>1482_bases ATGTACAAAGAGCCTAAATATAGAACCATATTAGAATCGACAAAAGAAGAATTAAATAAATTAAGAAATATATCTTTAAA TGATAAATATAAACCACTATTTCATATACATCCACAACATGGACTACTTAATGACCCAAATGGATTAGCATATTATAATG GTAAGTATCATGTATTTTATCAATGGTATCCATATGATGCAACTCATGGAATGAAGCATTGGGCTTATGTAAGTTCTGAT GATTTTGTAAACTGGAATAGAGAAGATGTAGCATTAATACCAATCGAAAGTTATGAATCTCATGGAGCATATTCAGGTAA TGCGATAGAGGTAGATGGAAAATTGCATATGTATTATACAGGGAATATAAAATATAGTGCAGAAGATAGATATGCATATC AAAACTTAGCTATAATGAACAAGGATGGTAAAATAACTAAATATGAAAATAATCCAATAGTAAGTGAAATACCAAAAGGA TATACAGGACATGTAAGAGACCCAAAAGTATTTAAAAGAAAGGATAAATACTTTATGTTACTTGGAGCACAAACAAGTGA TAAAAAAGGAGTTATAATAGTATATGAATCTAAAAACTCTATAGATTGGAATTTTAAAGGAGAATTAAATGTAAAAAACA TAGATGAAGATTTTGGTTACATGTGGGAATGTCCAGATTATATTAATATAGATGAAAAAGATATATTAATATTTTCACCA CAAGGAGTAGAACCTAAAGGATTTGATTATCAAAATATATATAATGTAGTATATGCTATTGGTAATATGGATTTAGATAA TTTAACATTTGAAATAGATACAATGAAAGAACTGGAAAAAGGATTTGATTTCTATGCTCCACAAACATTTATAAAGGACT CACAAATAATACTATTTGCATGGGCTGGAATGGGAGAAGTTTTATACCCTACAGATAAAAACAAATGGGCACATTGTCTA ACTGTTCCAAGAAAATTAAATATAAAAAATAATAAGCTATTGCAAATGCCTGTAGATGAATTAATTAAATTAAGATATGA TGAAACAAGTGGGCAAAATACTATAAAGAATAATATCAATATTATAGAAAATAATGAAAATTTATATGAGCTTAATATTA ATATAAAAAATATTGACAGCAATAAATTTGGGCTGGAATTATTTTCATCACAAGATGAAGGTGTAAAATTAGAATTTAAC AAATTAGGAAACATTGTAACTTTAGACAGAAGCAACTTTAAAAAAGTTTTCGGTGTTGAATATGGAACAAATAGAAAAGA ATATATAAATATTGATGAAAATACTAATATCAAAGTACTAGCGGATAGAAGTATTTTAGAAATTTTTATAAATGATGGAG AAGTAGTATTTACTAGTAGAATATTTGCTAAAGAAAATTCTAATCAAATAAGGGTTTATAGTGATAAAATAGTAGAGTAT GAGTATACTAAATTTAAATTAAAGCAAGGTATTGAATTATAA
Upstream 100 bases:
>100_bases AAATATAAAAGGTGTAGCACATTGTGTAACAAGATTAAGAATTGTTTTAGATAGCAATAATAAAGCAAATATAAAATTAT AAAAGAAAAGGAATAAAAAT
Downstream 100 bases:
>100_bases AAACACATTATAAGGGGTAGAAAAGATGAAAAAAGTAATTAGTATAGGAGAAGCTTTAATAGACTTTATACCTAATCAAA ATGGTGGTAAATTAAAAAAT
Product: sucrose-6-phosphate hydrolase
Products: NA
Alternate protein names: Sucrase; Invertase [H]
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MYKEPKYRTILESTKEELNKLRNISLNDKYKPLFHIHPQHGLLNDPNGLAYYNGKYHVFYQWYPYDATHGMKHWAYVSSD DFVNWNREDVALIPIESYESHGAYSGNAIEVDGKLHMYYTGNIKYSAEDRYAYQNLAIMNKDGKITKYENNPIVSEIPKG YTGHVRDPKVFKRKDKYFMLLGAQTSDKKGVIIVYESKNSIDWNFKGELNVKNIDEDFGYMWECPDYINIDEKDILIFSP QGVEPKGFDYQNIYNVVYAIGNMDLDNLTFEIDTMKELEKGFDFYAPQTFIKDSQIILFAWAGMGEVLYPTDKNKWAHCL TVPRKLNIKNNKLLQMPVDELIKLRYDETSGQNTIKNNINIIENNENLYELNINIKNIDSNKFGLELFSSQDEGVKLEFN KLGNIVTLDRSNFKKVFGVEYGTNRKEYINIDENTNIKVLADRSILEIFINDGEVVFTSRIFAKENSNQIRVYSDKIVEY EYTKFKLKQGIEL
Sequences:
>Translated_493_residues MYKEPKYRTILESTKEELNKLRNISLNDKYKPLFHIHPQHGLLNDPNGLAYYNGKYHVFYQWYPYDATHGMKHWAYVSSD DFVNWNREDVALIPIESYESHGAYSGNAIEVDGKLHMYYTGNIKYSAEDRYAYQNLAIMNKDGKITKYENNPIVSEIPKG YTGHVRDPKVFKRKDKYFMLLGAQTSDKKGVIIVYESKNSIDWNFKGELNVKNIDEDFGYMWECPDYINIDEKDILIFSP QGVEPKGFDYQNIYNVVYAIGNMDLDNLTFEIDTMKELEKGFDFYAPQTFIKDSQIILFAWAGMGEVLYPTDKNKWAHCL TVPRKLNIKNNKLLQMPVDELIKLRYDETSGQNTIKNNINIIENNENLYELNINIKNIDSNKFGLELFSSQDEGVKLEFN KLGNIVTLDRSNFKKVFGVEYGTNRKEYINIDENTNIKVLADRSILEIFINDGEVVFTSRIFAKENSNQIRVYSDKIVEY EYTKFKLKQGIEL >Mature_493_residues MYKEPKYRTILESTKEELNKLRNISLNDKYKPLFHIHPQHGLLNDPNGLAYYNGKYHVFYQWYPYDATHGMKHWAYVSSD DFVNWNREDVALIPIESYESHGAYSGNAIEVDGKLHMYYTGNIKYSAEDRYAYQNLAIMNKDGKITKYENNPIVSEIPKG YTGHVRDPKVFKRKDKYFMLLGAQTSDKKGVIIVYESKNSIDWNFKGELNVKNIDEDFGYMWECPDYINIDEKDILIFSP QGVEPKGFDYQNIYNVVYAIGNMDLDNLTFEIDTMKELEKGFDFYAPQTFIKDSQIILFAWAGMGEVLYPTDKNKWAHCL TVPRKLNIKNNKLLQMPVDELIKLRYDETSGQNTIKNNINIIENNENLYELNINIKNIDSNKFGLELFSSQDEGVKLEFN KLGNIVTLDRSNFKKVFGVEYGTNRKEYINIDENTNIKVLADRSILEIFINDGEVVFTSRIFAKENSNQIRVYSDKIVEY EYTKFKLKQGIEL
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=497, Percent_Identity=25.7545271629779, Blast_Score=111, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR006232 [H]
Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.26 [H]
Molecular weight: Translated: 57650; Mature: 57650
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKEPKYRTILESTKEELNKLRNISLNDKYKPLFHIHPQHGLLNDPNGLAYYNGKYHVFY CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCEEEEEE QWYPYDATHGMKHWAYVSSDDFVNWNREDVALIPIESYESHGAYSGNAIEVDGKLHMYYT EEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEE GNIKYSAEDRYAYQNLAIMNKDGKITKYENNPIVSEIPKGYTGHVRDPKVFKRKDKYFML CCEEECCCCCEEEEEEEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCHHHCCCCCEEEE LGAQTSDKKGVIIVYESKNSIDWNFKGELNVKNIDEDFGYMWECPDYINIDEKDILIFSP EECCCCCCCCEEEEEECCCCCCEEEECEEEECCCCCCCCEEECCCCCCCCCCCCEEEECC QGVEPKGFDYQNIYNVVYAIGNMDLDNLTFEIDTMKELEKGFDFYAPQTFIKDSQIILFA CCCCCCCCCHHHHHEEHEEECCCCCCCEEEEEEHHHHHHCCCCCCCCHHHCCCCEEEEEE WAGMGEVLYPTDKNKWAHCLTVPRKLNIKNNKLLQMPVDELIKLRYDETSGQNTIKNNIN ECCCCCEEEECCCCCEEEEEECCEEECCCCCEEEECCHHHHHEEEECCCCCCCEECCCCE IIENNENLYELNINIKNIDSNKFGLELFSSQDEGVKLEFNKLGNIVTLDRSNFKKVFGVE EEECCCCEEEEEEEEEECCCCCCCEEEECCCCCCEEEEHHHCCCEEEECCCCCCEEEEEE YGTNRKEYINIDENTNIKVLADRSILEIFINDGEVVFTSRIFAKENSNQIRVYSDKIVEY ECCCCCEEEEECCCCCEEEEECCEEEEEEECCCCEEEEEEEEEECCCCEEEEEECEEEEE EYTKFKLKQGIEL EEEEEEECCCCCC >Mature Secondary Structure MYKEPKYRTILESTKEELNKLRNISLNDKYKPLFHIHPQHGLLNDPNGLAYYNGKYHVFY CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCEEEEEE QWYPYDATHGMKHWAYVSSDDFVNWNREDVALIPIESYESHGAYSGNAIEVDGKLHMYYT EEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEE GNIKYSAEDRYAYQNLAIMNKDGKITKYENNPIVSEIPKGYTGHVRDPKVFKRKDKYFML CCEEECCCCCEEEEEEEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCHHHCCCCCEEEE LGAQTSDKKGVIIVYESKNSIDWNFKGELNVKNIDEDFGYMWECPDYINIDEKDILIFSP EECCCCCCCCEEEEEECCCCCCEEEECEEEECCCCCCCCEEECCCCCCCCCCCCEEEECC QGVEPKGFDYQNIYNVVYAIGNMDLDNLTFEIDTMKELEKGFDFYAPQTFIKDSQIILFA CCCCCCCCCHHHHHEEHEEECCCCCCCEEEEEEHHHHHHCCCCCCCCHHHCCCCEEEEEE WAGMGEVLYPTDKNKWAHCLTVPRKLNIKNNKLLQMPVDELIKLRYDETSGQNTIKNNIN ECCCCCEEEECCCCCEEEEEECCEEECCCCCEEEECCHHHHHEEEECCCCCCCEECCCCE IIENNENLYELNINIKNIDSNKFGLELFSSQDEGVKLEFNKLGNIVTLDRSNFKKVFGVE EEECCCCEEEEEEEEEECCCCCCCEEEECCCCCCEEEEHHHCCCEEEECCCCCCEEEEEE YGTNRKEYINIDENTNIKVLADRSILEIFINDGEVVFTSRIFAKENSNQIRVYSDKIVEY ECCCCCEEEEECCCCCEEEEECCEEEEEEECCCCEEEEEEEEEECCCCEEEEEECEEEEE EYTKFKLKQGIEL EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8423155 [H]