Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yclQ [H]

Identifier: 126699254

GI number: 126699254

Start: 1912289

End: 1913254

Strand: Direct

Name: yclQ [H]

Synonym: CD1650

Alternate gene names: 126699254

Gene position: 1912289-1913254 (Clockwise)

Preceding gene: 126699253

Following gene: 126699255

Centisome position: 44.57

GC content: 26.92

Gene sequence:

>966_bases
ATGAATAAAAAAGCAGCAATAGTAGCAGCAATAGCTATTATAGGATTAGTGACAGTGTTTGCATTAGGTGGAAGTAAAAA
GAATGAATCAAAAACATCAGAAAATTCAAATAATACCATAAAGATAACTCATAACTTGGGAGAAACAGATGTAAAATTAA
ATCCTAAAAAAGTAGTAGTATTTGATTATTCGGCTTTAGATACAATGGATGCATTAGGTGTAGCTGAGAATTTAGTAGGA
CTTCCAAAAGCGAGTTTACCAGCATCTTTAGAAAAATATAAGGATAAGAAGTATACAGATTTAGGAGGCTTAAAAGAACC
AGATTTAGAAGGTATAAAGTCGGCAAATCCAGATTTAATTATAATAAATGGAAGACAAGAAGATTTTTATGAGCAATTGT
CAAAAATAGCACCAACAATAAGTACAAGTAAAGATGATAAGAAGTACTTAGAATCTGTTAAAAATAATATAGACAAAATA
GCAAAAATATTTGGAGTAGAAGAAAAAGCAAATCAAGAATTTAGTAAAATTGAAAAGAAAATAGAAACTTTGAATAAAAA
AGTAACAGATAAAAATTTAAATGCTTTAACTATAATGGTAAATGAAGGTAATTTAAGTGTATTTGGTGAAGAATCAAGAT
TTAGTATATTATACAATAGTTTTGGATTTGAAAATAAAGATAAAAATATAAAAGAATCAAGTCATGGACAAAATATTACT
TTTGAATATATAGCTAAACAAAATCCAGAAGTTATGTTCGTTATAGATAGAGGAATAGCTACTGGCAGTGATGTAAAAGA
AAGCTCAACTGCAAAATCTGTTTTGAACAATGATATAATAAAATCTATGGATGCATATAAGAATGATAATATAATATATT
TAGATTCACCAACATGGTATGTAAATGATGGTGGTCTAACATCTTTAAATAAAATGATAGATGATGCTTCAAAAGCGGTA
AATTAA

Upstream 100 bases:

>100_bases
TATTTTTAAAATATTGTATATGAAAATAAACTTGCTATATGATTTTTTATAAAGTTTTTAAATTAAAATAAAGATTAATA
GGAGAGAGGAAAATATTGAT

Downstream 100 bases:

>100_bases
TAATCCGATATAATTAATCAAAATGTATTTTTTATAAAATGATTATCAAATAAACTAGGAGTTTTTAAGAACTCCTAGTT
TATTTTTTGCATAAAAAAGA

Product: iron compound ABC transporter substrate-binding protein

Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNKKAAIVAAIAIIGLVTVFALGGSKKNESKTSENSNNTIKITHNLGETDVKLNPKKVVVFDYSALDTMDALGVAENLVG
LPKASLPASLEKYKDKKYTDLGGLKEPDLEGIKSANPDLIIINGRQEDFYEQLSKIAPTISTSKDDKKYLESVKNNIDKI
AKIFGVEEKANQEFSKIEKKIETLNKKVTDKNLNALTIMVNEGNLSVFGEESRFSILYNSFGFENKDKNIKESSHGQNIT
FEYIAKQNPEVMFVIDRGIATGSDVKESSTAKSVLNNDIIKSMDAYKNDNIIYLDSPTWYVNDGGLTSLNKMIDDASKAV
N

Sequences:

>Translated_321_residues
MNKKAAIVAAIAIIGLVTVFALGGSKKNESKTSENSNNTIKITHNLGETDVKLNPKKVVVFDYSALDTMDALGVAENLVG
LPKASLPASLEKYKDKKYTDLGGLKEPDLEGIKSANPDLIIINGRQEDFYEQLSKIAPTISTSKDDKKYLESVKNNIDKI
AKIFGVEEKANQEFSKIEKKIETLNKKVTDKNLNALTIMVNEGNLSVFGEESRFSILYNSFGFENKDKNIKESSHGQNIT
FEYIAKQNPEVMFVIDRGIATGSDVKESSTAKSVLNNDIIKSMDAYKNDNIIYLDSPTWYVNDGGLTSLNKMIDDASKAV
N
>Mature_321_residues
MNKKAAIVAAIAIIGLVTVFALGGSKKNESKTSENSNNTIKITHNLGETDVKLNPKKVVVFDYSALDTMDALGVAENLVG
LPKASLPASLEKYKDKKYTDLGGLKEPDLEGIKSANPDLIIINGRQEDFYEQLSKIAPTISTSKDDKKYLESVKNNIDKI
AKIFGVEEKANQEFSKIEKKIETLNKKVTDKNLNALTIMVNEGNLSVFGEESRFSILYNSFGFENKDKNIKESSHGQNIT
FEYIAKQNPEVMFVIDRGIATGSDVKESSTAKSVLNNDIIKSMDAYKNDNIIYLDSPTWYVNDGGLTSLNKMIDDASKAV
N

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35380; Mature: 35380

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKAAIVAAIAIIGLVTVFALGGSKKNESKTSENSNNTIKITHNLGETDVKLNPKKVVV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCEEEE
FDYSALDTMDALGVAENLVGLPKASLPASLEKYKDKKYTDLGGLKEPDLEGIKSANPDLI
EECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEE
IINGRQEDFYEQLSKIAPTISTSKDDKKYLESVKNNIDKIAKIFGVEEKANQEFSKIEKK
EEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IETLNKKVTDKNLNALTIMVNEGNLSVFGEESRFSILYNSFGFENKDKNIKESSHGQNIT
HHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
FEYIAKQNPEVMFVIDRGIATGSDVKESSTAKSVLNNDIIKSMDAYKNDNIIYLDSPTWY
EEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEE
VNDGGLTSLNKMIDDASKAVN
ECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKKAAIVAAIAIIGLVTVFALGGSKKNESKTSENSNNTIKITHNLGETDVKLNPKKVVV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCEEEE
FDYSALDTMDALGVAENLVGLPKASLPASLEKYKDKKYTDLGGLKEPDLEGIKSANPDLI
EECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEE
IINGRQEDFYEQLSKIAPTISTSKDDKKYLESVKNNIDKIAKIFGVEEKANQEFSKIEKK
EEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IETLNKKVTDKNLNALTIMVNEGNLSVFGEESRFSILYNSFGFENKDKNIKESSHGQNIT
HHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
FEYIAKQNPEVMFVIDRGIATGSDVKESSTAKSVLNNDIIKSMDAYKNDNIIYLDSPTWY
EEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEE
VNDGGLTSLNKMIDDASKAVN
ECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]

Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]