| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699184
Identifier: 126699184
GI number: 126699184
Start: 1832895
End: 1833377
Strand: Direct
Name: 126699184
Synonym: CD1581
Alternate gene names: NA
Gene position: 1832895-1833377 (Clockwise)
Preceding gene: 126699183
Following gene: 126699185
Centisome position: 42.72
GC content: 32.3
Gene sequence:
>483_bases ATGGAAAATAAAAAATGTTATTCAGAAGATTGGTATGAAAGAGGAGAATCTACAGCTAAATGGTTCCAAAATGATAGAGA AGAATATGAAAGAGAAGCATATGATGAAGATAGAGAAAGAAGAGGTTCAAACTGTGGATGTTCAGATTCAGGAGAAAATA GACCTAGAAACTGTGAAAGATTTAGAAGAGAAGCTGAGATAAGAGAAAGAGAAGCAAGAGAAGCATTCTGTGAATCTTCA GAGAAAAAGAAAGAGGCATTAGCATATGAATGTGAAGCTAGAAAATTATGGGAAGAAGCAGAAAAATACTGGGATGAATA TTCAAAATACAACTATAAAGGAATCGAATATTTAGCAGAAGCTGCTAGATTATTTGATGAAGGTATGGAATGTGAAGCTA GAAGAAATGGAAATAATGGAGGAAACAATAATAATTGTTGCCATAAATGCCATAAATGTAATTGTAACTGCTGTAGAAAA TAA
Upstream 100 bases:
>100_bases GTTTATATGTAACATATTTTGACGATTTTAATACTATATAGTATGAGATGAAACAAAACATCTCATAAAAAAATTAAAAT TAAAGGGAGAGATATGTTAT
Downstream 100 bases:
>100_bases AAAAATTAATTGACAAATCAATAGTTAAAATATATCATATTATGTATAATAAAAAGAAAATTCAGAAAAAAATAATGATT AGAAGAAATATAAGTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MENKKCYSEDWYERGESTAKWFQNDREEYEREAYDEDRERRGSNCGCSDSGENRPRNCERFRREAEIREREAREAFCESS EKKKEALAYECEARKLWEEAEKYWDEYSKYNYKGIEYLAEAARLFDEGMECEARRNGNNGGNNNNCCHKCHKCNCNCCRK
Sequences:
>Translated_160_residues MENKKCYSEDWYERGESTAKWFQNDREEYEREAYDEDRERRGSNCGCSDSGENRPRNCERFRREAEIREREAREAFCESS EKKKEALAYECEARKLWEEAEKYWDEYSKYNYKGIEYLAEAARLFDEGMECEARRNGNNGGNNNNCCHKCHKCNCNCCRK >Mature_160_residues MENKKCYSEDWYERGESTAKWFQNDREEYEREAYDEDRERRGSNCGCSDSGENRPRNCERFRREAEIREREAREAFCESS EKKKEALAYECEARKLWEEAEKYWDEYSKYNYKGIEYLAEAARLFDEGMECEARRNGNNGGNNNNCCHKCHKCNCNCCRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19257; Mature: 19257
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 8.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKKCYSEDWYERGESTAKWFQNDREEYEREAYDEDRERRGSNCGCSDSGENRPRNCER CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH FRREAEIREREAREAFCESSEKKKEALAYECEARKLWEEAEKYWDEYSKYNYKGIEYLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AARLFDEGMECEARRNGNNGGNNNNCCHKCHKCNCNCCRK HHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHCCCCHHCCC >Mature Secondary Structure MENKKCYSEDWYERGESTAKWFQNDREEYEREAYDEDRERRGSNCGCSDSGENRPRNCER CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH FRREAEIREREAREAFCESSEKKKEALAYECEARKLWEEAEKYWDEYSKYNYKGIEYLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AARLFDEGMECEARRNGNNGGNNNNCCHKCHKCNCNCCRK HHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA