Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is tlpA

Identifier: 126699174

GI number: 126699174

Start: 1819510

End: 1819602

Strand: Direct

Name: tlpA

Synonym: CD1571

Alternate gene names: NA

Gene position: 1819510-1819602 (Clockwise)

Preceding gene: 126699173

Following gene: 126699175

Centisome position: 42.41

GC content: 33.33

Gene sequence:

>93_bases
ATGGGGAGACATCTTTGGAATCCTAGTTATTTCGTTGCTACTGTATCAGAAAATACAGAGGAGCAGATAAGAAAATATAG
AAAAAACAAGTAA

Upstream 100 bases:

>100_bases
AGTAATTGCATATTTTAATATTATGATAGGTGATGAAAAATGGAAGTTACTCATAATAGAGGATATGCATATAGTATGTC
AAATATAGACATCCAGTATT

Downstream 100 bases:

>100_bases
AGTGAGGTGGCAGTAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAAACAACAAGAGTTAATTAACAAAAC
TTTTGGATGTTGTAGATTTG

Product: transposase-like protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 30; Mature: 29

Protein sequence:

>30_residues
MGRHLWNPSYFVATVSENTEEQIRKYRKNK

Sequences:

>Translated_30_residues
MGRHLWNPSYFVATVSENTEEQIRKYRKNK
>Mature_29_residues
GRHLWNPSYFVATVSENTEEQIRKYRKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3683; Mature: 3552

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRHLWNPSYFVATVSENTEEQIRKYRKNK
CCCCCCCCCEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure 
GRHLWNPSYFVATVSENTEEQIRKYRKNK
CCCCCCCCEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA