| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is hisC [H]
Identifier: 126699153
GI number: 126699153
Start: 1797425
End: 1798474
Strand: Direct
Name: hisC [H]
Synonym: CD1549
Alternate gene names: 126699153
Gene position: 1797425-1798474 (Clockwise)
Preceding gene: 126699152
Following gene: 126699154
Centisome position: 41.9
GC content: 26.38
Gene sequence:
>1050_bases TTGAGAGAAAAAGAAAGCATAAGAGAGTTAAGGGGATATGAACCAAATCACGTAAACTGTAAAGTAAAACTTGATGCAAA TGAAGGAAGTAAGAGGTTGTTTAAATACCTTATTAAAGAAATTTCAGATAGTGATATAGATTTAAATTTATATCCTGAAG ATTCTTATAGTGATTTGAAAGAATCTATAATAGATTACATAAATATTTCTGGAGTAAATAAGAAAAATCTTCTAGTAGGA AACGGTTCAAGTGAAATAATTGATTTAATAATACATACTTTTGTAGATAAAGACGAAGTAATATTGAGTTTCTCTCCAAG TTTTAGTATGTATTCTATATATAGTCAGATAAATGGGTCTAAATTTATAGGTGTTGAAAGTGATGAAAATTTAGTTATAA ATATAGATAATGTGATTGAAAAAGTAAAGGAGAATAATCCTAAAATAGTAATTGTATGTAATCCTAATAATCCAACTGGA ACAATATTAAAGAGGGAAGAGATAATAAAGCTTTTAGATTCAACTAATAGTCTAGTGGTTTTAGATGAAGCATATATGGA TTTTGGAGAAGAAAGCATGTTAAGTGATGTTTTTAAGTATGATAATCTAATAGTTCTTAGAACTTTATCAAAGGCATTTG GATTGGCTGGAATAAGAACAGGATATATGTTATCTAATAGTAGTTTAATAAATTCTGTTGAGAAAGTAAGACCTCCATAT AATTTAAATTCATTATCAGACTTTATTGCTACAAGAGCACTTAGAAATAAAGATGTGGTAAAAGCTTATATAAAGGAAGT AAAAGAGGAAAGAGAAGTTTTATATGAAGAAATGATTGGTATGGGAATTAAAGCATACAAATCACAAGCAAATTTTATAT TATTTTATTCTGAAATCGAAAATTTATCACAAAAACTTATTGATAGAGGAGTTTTAATAAGAAAATTTGGTGGAAAGTTA GAAAATTATTACAGAGTTACAATTGGTGATAAAGAAGAAAATTCTATGTTTGTTGGAGCTATAAGAGATATTTTGAAAAA GGAGAAATAG
Upstream 100 bases:
>100_bases TAGCTATAGATTTAAATATGAACAAATTCAGAATATAATTCGTTTATTTGAAGAACTTGATAATTAAAATATAATTGAGC TTTATAAGGAGGGATTTAAG
Downstream 100 bases:
>100_bases GTATGAGAATTTGGAAGGTAGAAAGAAATACTCTTGAAACACAGATTTTAGTAGAATTAAATATTGATGGTTCTGGTAAA GCTGAAATAGATACTGGAAT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MREKESIRELRGYEPNHVNCKVKLDANEGSKRLFKYLIKEISDSDIDLNLYPEDSYSDLKESIIDYINISGVNKKNLLVG NGSSEIIDLIIHTFVDKDEVILSFSPSFSMYSIYSQINGSKFIGVESDENLVINIDNVIEKVKENNPKIVIVCNPNNPTG TILKREEIIKLLDSTNSLVVLDEAYMDFGEESMLSDVFKYDNLIVLRTLSKAFGLAGIRTGYMLSNSSLINSVEKVRPPY NLNSLSDFIATRALRNKDVVKAYIKEVKEEREVLYEEMIGMGIKAYKSQANFILFYSEIENLSQKLIDRGVLIRKFGGKL ENYYRVTIGDKEENSMFVGAIRDILKKEK
Sequences:
>Translated_349_residues MREKESIRELRGYEPNHVNCKVKLDANEGSKRLFKYLIKEISDSDIDLNLYPEDSYSDLKESIIDYINISGVNKKNLLVG NGSSEIIDLIIHTFVDKDEVILSFSPSFSMYSIYSQINGSKFIGVESDENLVINIDNVIEKVKENNPKIVIVCNPNNPTG TILKREEIIKLLDSTNSLVVLDEAYMDFGEESMLSDVFKYDNLIVLRTLSKAFGLAGIRTGYMLSNSSLINSVEKVRPPY NLNSLSDFIATRALRNKDVVKAYIKEVKEEREVLYEEMIGMGIKAYKSQANFILFYSEIENLSQKLIDRGVLIRKFGGKL ENYYRVTIGDKEENSMFVGAIRDILKKEK >Mature_349_residues MREKESIRELRGYEPNHVNCKVKLDANEGSKRLFKYLIKEISDSDIDLNLYPEDSYSDLKESIIDYINISGVNKKNLLVG NGSSEIIDLIIHTFVDKDEVILSFSPSFSMYSIYSQINGSKFIGVESDENLVINIDNVIEKVKENNPKIVIVCNPNNPTG TILKREEIIKLLDSTNSLVVLDEAYMDFGEESMLSDVFKYDNLIVLRTLSKAFGLAGIRTGYMLSNSSLINSVEKVRPPY NLNSLSDFIATRALRNKDVVKAYIKEVKEEREVLYEEMIGMGIKAYKSQANFILFYSEIENLSQKLIDRGVLIRKFGGKL ENYYRVTIGDKEENSMFVGAIRDILKKEK
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=353, Percent_Identity=31.1614730878187, Blast_Score=157, Evalue=7e-40, Organism=Escherichia coli, GI1788627, Length=202, Percent_Identity=25.2475247524752, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=355, Percent_Identity=31.830985915493, Blast_Score=135, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39803; Mature: 39803
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREKESIRELRGYEPNHVNCKVKLDANEGSKRLFKYLIKEISDSDIDLNLYPEDSYSDLK CCCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH ESIIDYINISGVNKKNLLVGNGSSEIIDLIIHTFVDKDEVILSFSPSFSMYSIYSQINGS HHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCC KFIGVESDENLVINIDNVIEKVKENNPKIVIVCNPNNPTGTILKREEIIKLLDSTNSLVV EEEEECCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCEEEHHHHHHHHCCCCCEEE LDEAYMDFGEESMLSDVFKYDNLIVLRTLSKAFGLAGIRTGYMLSNSSLINSVEKVRPPY EEHHHHCCCHHHHHHHHHHHCCEEEEEHHHHHHCCCHHCCCEEECCCHHHHHHHHHCCCC NLNSLSDFIATRALRNKDVVKAYIKEVKEEREVLYEEMIGMGIKAYKSQANFILFYSEIE CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHHHH NLSQKLIDRGVLIRKFGGKLENYYRVTIGDKEENSMFVGAIRDILKKEK HHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MREKESIRELRGYEPNHVNCKVKLDANEGSKRLFKYLIKEISDSDIDLNLYPEDSYSDLK CCCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH ESIIDYINISGVNKKNLLVGNGSSEIIDLIIHTFVDKDEVILSFSPSFSMYSIYSQINGS HHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCC KFIGVESDENLVINIDNVIEKVKENNPKIVIVCNPNNPTGTILKREEIIKLLDSTNSLVV EEEEECCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCEEEHHHHHHHHCCCCCEEE LDEAYMDFGEESMLSDVFKYDNLIVLRTLSKAFGLAGIRTGYMLSNSSLINSVEKVRPPY EEHHHHCCCHHHHHHHHHHHCCEEEEEHHHHHHCCCHHCCCEEECCCHHHHHHHHHCCCC NLNSLSDFIATRALRNKDVVKAYIKEVKEEREVLYEEMIGMGIKAYKSQANFILFYSEIE CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHHHH NLSQKLIDRGVLIRKFGGKLENYYRVTIGDKEENSMFVGAIRDILKKEK HHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA