| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699101
Identifier: 126699101
GI number: 126699101
Start: 1734230
End: 1734706
Strand: Direct
Name: 126699101
Synonym: CD1497
Alternate gene names: NA
Gene position: 1734230-1734706 (Clockwise)
Preceding gene: 126699099
Following gene: 126699102
Centisome position: 40.42
GC content: 31.24
Gene sequence:
>477_bases ATGTCAAAAGAATTAGTAAAAGATAGAGTAATAAAATATTTAATAGAAGATTTATTAGTACCTCAAGATATGATTGATAC AAATGTTGAGTTGGCAGAATTTGAAGAAGGTGCAGAAGGAATTTTAGATATTGTTGTAAATGTTAAAGATGAAGAAGATT ATTATGCACCTGTAATGATAGTGCAATGTTTAGATGAAGATGTGGAGTTAGAAGGAGAAGTTTTACAAAAACAAATAGAA TTTTTAGAAGACGTGGATAATATAACTATGTCAGGTAGATTGGTTTTAACTAATGGGGATGCTATGATGTACGCTGATTG GAGAGGGGAAGAATACGATACTGAGGCAGCTCTTCCAACTTATGATATAATGGTAAAAGAGTTTCATGAAATGGAACAAC AGGCAAAAGATTTAGAAGAACATCATCACCATGATGAAAATTGTGGATGTGGATGTAATCATCATCATGAAAATTAA
Upstream 100 bases:
>100_bases AAAAATAATTTTTGTAAGAGATTGAAAAAACAATTAATGTAGTATACTATAATATAGAAATGATTATGATAATGTTATAG AATCGGAAGGAGAAAAATAA
Downstream 100 bases:
>100_bases ATATTGAGCATATATATAAAAAAAGACTGTTTAGTAAACAGTCTTTTTTTAGACATATATCATTCAAAAAACTAAGAATA TAACAACATATAATAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSKELVKDRVIKYLIEDLLVPQDMIDTNVELAEFEEGAEGILDIVVNVKDEEDYYAPVMIVQCLDEDVELEGEVLQKQIE FLEDVDNITMSGRLVLTNGDAMMYADWRGEEYDTEAALPTYDIMVKEFHEMEQQAKDLEEHHHHDENCGCGCNHHHEN
Sequences:
>Translated_158_residues MSKELVKDRVIKYLIEDLLVPQDMIDTNVELAEFEEGAEGILDIVVNVKDEEDYYAPVMIVQCLDEDVELEGEVLQKQIE FLEDVDNITMSGRLVLTNGDAMMYADWRGEEYDTEAALPTYDIMVKEFHEMEQQAKDLEEHHHHDENCGCGCNHHHEN >Mature_157_residues SKELVKDRVIKYLIEDLLVPQDMIDTNVELAEFEEGAEGILDIVVNVKDEEDYYAPVMIVQCLDEDVELEGEVLQKQIEF LEDVDNITMSGRLVLTNGDAMMYADWRGEEYDTEAALPTYDIMVKEFHEMEQQAKDLEEHHHHDENCGCGCNHHHEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18289; Mature: 18157
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKELVKDRVIKYLIEDLLVPQDMIDTNVELAEFEEGAEGILDIVVNVKDEEDYYAPVMI CCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VQCLDEDVELEGEVLQKQIEFLEDVDNITMSGRLVLTNGDAMMYADWRGEEYDTEAALPT HHHHCCCCCCHHHHHHHHHHHHHHHHCCEECCEEEEECCCEEEEECCCCCCCCCCCCCCH YDIMVKEFHEMEQQAKDLEEHHHHDENCGCGCNHHHEN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKELVKDRVIKYLIEDLLVPQDMIDTNVELAEFEEGAEGILDIVVNVKDEEDYYAPVMI CHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VQCLDEDVELEGEVLQKQIEFLEDVDNITMSGRLVLTNGDAMMYADWRGEEYDTEAALPT HHHHCCCCCCHHHHHHHHHHHHHHHHCCEECCEEEEECCCEEEEECCCCCCCCCCCCCCH YDIMVKEFHEMEQQAKDLEEHHHHDENCGCGCNHHHEN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA