Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699067

Identifier: 126699067

GI number: 126699067

Start: 1691646

End: 1692092

Strand: Direct

Name: 126699067

Synonym: CD1463

Alternate gene names: NA

Gene position: 1691646-1692092 (Clockwise)

Preceding gene: 126699062

Following gene: 126699068

Centisome position: 39.43

GC content: 25.73

Gene sequence:

>447_bases
ATGTTAACATATTTAATGAAAAGACAAATGCATAAAAAAGATGATGGAATGAGTAAACCAATGATGATTACAGGAGCTGT
AATTACAGGTGTAGGAGCATATGCTGTATATAAAATGGTAAAAAGCCATAAATCTAATTCTCAAATGGTCAATACAAATT
ATTATGGAAATAGCGATTATGATGATTATAAATATGACGAATTTGATTATGACTGTGATTGTAGAGACACAAAACAAGAT
TATGAATATGAAGAATTAAAAAAAAAAGTAAAAGAATTTAATTCAAGAAGAATAAATTGTGAAAATTGTCCACATGTTTC
TCAAGAAGAAATGATGCAATATGTAAATAGTGTTAAAGATGTAAAGGAAGAGCTTGATTTACATGAAGATGCTAAAAAAG
ATAATATTTACAAAGAAGATGAATACAAAAAATATGAAGAAGAATAA

Upstream 100 bases:

>100_bases
TATTTTGTAAAAATTGTAATTTAAAAAATAACATAATTTTTATTAAAATAATACAGATACTATTTATAGATAGAAATAAA
AATTAGAAAGGAGAAAAAAT

Downstream 100 bases:

>100_bases
GTAATATTTTGTATAACTGAACAAATAGTAATGTCAAATTATTTAATATCTAGTTTTAATATGTAAGTTGTAACTTAACT
TGAAAGAATCAGTATCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDYDDYKYDEFDYDCDCRDTKQD
YEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKDVKEELDLHEDAKKDNIYKEDEYKKYEEE

Sequences:

>Translated_148_residues
MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDYDDYKYDEFDYDCDCRDTKQD
YEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKDVKEELDLHEDAKKDNIYKEDEYKKYEEE
>Mature_148_residues
MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDYDDYKYDEFDYDCDCRDTKQD
YEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKDVKEELDLHEDAKKDNIYKEDEYKKYEEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17772; Mature: 17772

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDY
CHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
DDYKYDEFDYDCDCRDTKQDYEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
VKEELDLHEDAKKDNIYKEDEYKKYEEE
HHHHHHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDY
CHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
DDYKYDEFDYDCDCRDTKQDYEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
VKEELDLHEDAKKDNIYKEDEYKKYEEE
HHHHHHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA