Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yqfN [H]

Identifier: 126699060

GI number: 126699060

Start: 1686037

End: 1686726

Strand: Direct

Name: yqfN [H]

Synonym: CD1456

Alternate gene names: 126699060

Gene position: 1686037-1686726 (Clockwise)

Preceding gene: 126699059

Following gene: 126699061

Centisome position: 39.3

GC content: 29.57

Gene sequence:

>690_bases
TTGAAATTAACAGATAGATTATTGAAAATAGCATCATTAGTGTCAGATGGTAAAAAAATAGCTGATATAGGAACGGACCA
CGGATACATACCAGTATATTTGTTAAAAGAGGGAAAAGTACCATTTGCAGTGCTAGCGGATGTTAATAAAGGACCTCTTG
ACAATGCACATAAAGAAGTCATACAGAACAATCTTTTAGATAAAGTTGATTTACGATTGGGTTCTGGTATAGAGATACTT
GAAATAGGGGAAGTAGAAGAAGTGATAATTGCTGGTATGGGTGGAATCTTGATAAGTGAGCTTCTCGAAGCTAAAAAAGA
AGTAGCACATAATGTAGAAAAATTAATATTACAGCCAATGCAAGCACAAGAAGAACTTAGATATTACCTTTTAAACAACG
GATATGAAATTTTAGAAGAAGTTTTAGTGAGAGAAGATTTTAGAATATATGAGATAATTGTTGCCAAATATACAGGTAAA
AATACTATAATAGAAGATGAGATATATTATGAGGTTGGAATAAAGCTTTTAGAAAACAAAGATTCTCTTTTTAATGATTT
TATAGAAAAAAAGATAAAGACATATAGTTCTATAGTTAATAAATTAGAAGGGAAAAATGGGGAAGCTATAGATAAGAAGA
GAAAGGAAAGCGAAGTTGCAATAAAAAAACTTGAAAATTTAATAAAATAA

Upstream 100 bases:

>100_bases
TGTAGTAAAGATTTAATTTTATTTTTGTAGTTATTTCAGTCTAATATCTATAACTTGGATTAAATCCTATAAATAAAGGG
AATTGAAAGGAGAATTATAT

Downstream 100 bases:

>100_bases
ATAGGAGGTATATATGCTATTAAAGAGTCTAACTAGAAAAATTGAAAAAAAGTATCCTCTAAACTTAGCAGAGGATTGGG
ATAATGTAGGTCTTATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEVIQNNLLDKVDLRLGSGIEIL
EIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPMQAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGK
NTIIEDEIYYEVGIKLLENKDSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK

Sequences:

>Translated_229_residues
MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEVIQNNLLDKVDLRLGSGIEIL
EIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPMQAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGK
NTIIEDEIYYEVGIKLLENKDSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK
>Mature_229_residues
MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEVIQNNLLDKVDLRLGSGIEIL
EIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPMQAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGK
NTIIEDEIYYEVGIKLLENKDSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK

Specific function: Unknown

COG id: COG2384

COG function: function code R; Predicted SAM-dependent methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006901 [H]

Pfam domain/function: PF04816 DUF633 [H]

EC number: NA

Molecular weight: Translated: 25928; Mature: 25928

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEV
CCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHH
IQNNLLDKVDLRLGSGIEILEIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPM
HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGKNTIIEDEIYYEVGIKLLENK
HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHEEEHCCCCCCEECHHHHHHHHHHHHCCC
DSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEV
CCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHH
IQNNLLDKVDLRLGSGIEILEIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPM
HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGKNTIIEDEIYYEVGIKLLENK
HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHEEEHCCCCCCEECHHHHHHHHHHHHCCC
DSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]