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The map label for this gene is xkdP [H]

Identifier: 126698968

GI number: 126698968

Start: 1581834

End: 1582256

Strand: Direct

Name: xkdP [H]

Synonym: CD1367

Alternate gene names: 126698968

Gene position: 1581834-1582256 (Clockwise)

Preceding gene: 126698967

Following gene: 126698969

Centisome position: 36.87

GC content: 29.31

Gene sequence:

>423_bases
ATGGAAATGTGGCTTAGACAAGCTGAAGATAGATTTAGATTTCCAGTATTTCCATCTTCCTTTAGTATTAATGGAAAAGC
TGCTGTAAACTCTTCTAGTATACTCAAAATAGGTGAAATAGCAACTTTTGGTGGTGTAGCTCTTAAAAGCATTTCAATAT
CAAGTTTTTTTCCAAATAAAGACTATACTTTCTGTGACTATACAGGTTTTCCATCACCATATGATTGTGTAAATAAGATA
GAAAAATGGATGAAGGAAGGTTTTATATTAAGATTTACAATTACGGAAACAAATATAAATATGGAAGTCATAATTGAAGG
GTTTAGTTATGAAGAAAGAGATGGGACTCGAGATGTATATTTTACATTAGATTTAAAAGAGTATAAAAGAATAAAGATAC
CAAAAGTAACTCCAAAACAATAA

Upstream 100 bases:

>100_bases
TAGCTGATACAATAGTAATTAGAGAAGAAGCTGATATAGAAAAGATAACATCAAAATTAGTTGCAAGTATCCAATTGGCA
CAGTTAGGGGGTGTCTTATA

Downstream 100 bases:

>100_bases
CTATTATAGATAATAAGTTATAAATAACTGCTGATAGAATTAAATGAAAAGGCAGGTGATTTTTTATTATTAAGATTTGG
GTACACATAAAAAACGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MEMWLRQAEDRFRFPVFPSSFSINGKAAVNSSSILKIGEIATFGGVALKSISISSFFPNKDYTFCDYTGFPSPYDCVNKI
EKWMKEGFILRFTITETNINMEVIIEGFSYEERDGTRDVYFTLDLKEYKRIKIPKVTPKQ

Sequences:

>Translated_140_residues
MEMWLRQAEDRFRFPVFPSSFSINGKAAVNSSSILKIGEIATFGGVALKSISISSFFPNKDYTFCDYTGFPSPYDCVNKI
EKWMKEGFILRFTITETNINMEVIIEGFSYEERDGTRDVYFTLDLKEYKRIKIPKVTPKQ
>Mature_140_residues
MEMWLRQAEDRFRFPVFPSSFSINGKAAVNSSSILKIGEIATFGGVALKSISISSFFPNKDYTFCDYTGFPSPYDCVNKI
EKWMKEGFILRFTITETNINMEVIIEGFSYEERDGTRDVYFTLDLKEYKRIKIPKVTPKQ

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 16216; Mature: 16216

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMWLRQAEDRFRFPVFPSSFSINGKAAVNSSSILKIGEIATFGGVALKSISISSFFPNK
CCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEEEEECCCC
DYTFCDYTGFPSPYDCVNKIEKWMKEGFILRFTITETNINMEVIIEGFSYEERDGTRDVY
CCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEE
FTLDLKEYKRIKIPKVTPKQ
EEEEHHHCCEEECCCCCCCC
>Mature Secondary Structure
MEMWLRQAEDRFRFPVFPSSFSINGKAAVNSSSILKIGEIATFGGVALKSISISSFFPNK
CCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEEEEECCCC
DYTFCDYTGFPSPYDCVNKIEKWMKEGFILRFTITETNINMEVIIEGFSYEERDGTRDVY
CCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEE
FTLDLKEYKRIKIPKVTPKQ
EEEEHHHCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]