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The map label for this gene is ywhC [H]

Identifier: 126698891

GI number: 126698891

Start: 1501778

End: 1502374

Strand: Direct

Name: ywhC [H]

Synonym: CD1294

Alternate gene names: 126698891

Gene position: 1501778-1502374 (Clockwise)

Preceding gene: 126698888

Following gene: 126698892

Centisome position: 35.0

GC content: 30.49

Gene sequence:

>597_bases
ATGTTAAGTATGAATATAGGAGAAATAGTAGCAAGTTTAGTTGGTATAGCTATGGCAATATCAATACATGAGTTTGGCCA
TGCTTATTCAGCTCACTTATTGGGAGATGATACAGCTAAAGCTTATGGTAGAATGACATTAAATCCTGTAAGACATGTTG
ACCCAATAGGTCTTTTGGCTATGTTTATCCTTAAGATAGGGTGGGCAAAGCCAGTACCAGTAAATCCAAATAACTTTAAA
AACTATAAGATAGGAAACCTGATAGTTTCACTTGCAGGCGTTTTTTGTAATGTTTTGACTGCTATACTGTGTGTAATTAT
CAATAAGTATGTGCATATGTATGCTATAAATACAATAGCTGAATATGTGTTTTTATATAGTATTGGATTTGCAGCTTTTA
ACTTACTTCCGATACCTCCACTTGATGGATGGGGAGTTATATCTACATTTGTACCATATAAATGGAATGAATATTTGTAT
AAATTTGAAAGCATGAGTTATATAATTTTATTAATTGCTTTATTTACTGGTATGTATAGAATAATATTAACACCAATATA
TGCAGTGTTGCTAAAAATAGTATATTTATTTGTTTAA

Upstream 100 bases:

>100_bases
TGCCTAGAAGTTAAAATTATTATAATGTAAAATAATTTTGATTATAAGCTATTTAATTGTTATAATAATATTAAAAATTT
AATTTAGGAGATGTACATTA

Downstream 100 bases:

>100_bases
TATAATAAACAGATTAAAGAGGGATTGATATGAAGTATAATATACAATTACAAGTCTATGAGGGACCATTAGATTTACTT
TATGATTTAATAACAAAGCA

Product: membrane-associated peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLSMNIGEIVASLVGIAMAISIHEFGHAYSAHLLGDDTAKAYGRMTLNPVRHVDPIGLLAMFILKIGWAKPVPVNPNNFK
NYKIGNLIVSLAGVFCNVLTAILCVIINKYVHMYAINTIAEYVFLYSIGFAAFNLLPIPPLDGWGVISTFVPYKWNEYLY
KFESMSYIILLIALFTGMYRIILTPIYAVLLKIVYLFV

Sequences:

>Translated_198_residues
MLSMNIGEIVASLVGIAMAISIHEFGHAYSAHLLGDDTAKAYGRMTLNPVRHVDPIGLLAMFILKIGWAKPVPVNPNNFK
NYKIGNLIVSLAGVFCNVLTAILCVIINKYVHMYAINTIAEYVFLYSIGFAAFNLLPIPPLDGWGVISTFVPYKWNEYLY
KFESMSYIILLIALFTGMYRIILTPIYAVLLKIVYLFV
>Mature_198_residues
MLSMNIGEIVASLVGIAMAISIHEFGHAYSAHLLGDDTAKAYGRMTLNPVRHVDPIGLLAMFILKIGWAKPVPVNPNNFK
NYKIGNLIVSLAGVFCNVLTAILCVIINKYVHMYAINTIAEYVFLYSIGFAAFNLLPIPPLDGWGVISTFVPYKWNEYLY
KFESMSYIILLIALFTGMYRIILTPIYAVLLKIVYLFV

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22162; Mature: 22162

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMNIGEIVASLVGIAMAISIHEFGHAYSAHLLGDDTAKAYGRMTLNPVRHVDPIGLLA
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCHHHHCCHHHHHH
MFILKIGWAKPVPVNPNNFKNYKIGNLIVSLAGVFCNVLTAILCVIINKYVHMYAINTIA
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYVFLYSIGFAAFNLLPIPPLDGWGVISTFVPYKWNEYLYKFESMSYIILLIALFTGMYR
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IILTPIYAVLLKIVYLFV
HHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLSMNIGEIVASLVGIAMAISIHEFGHAYSAHLLGDDTAKAYGRMTLNPVRHVDPIGLLA
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCHHHHCCHHHHHH
MFILKIGWAKPVPVNPNNFKNYKIGNLIVSLAGVFCNVLTAILCVIINKYVHMYAINTIA
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYVFLYSIGFAAFNLLPIPPLDGWGVISTFVPYKWNEYLYKFESMSYIILLIALFTGMYR
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IILTPIYAVLLKIVYLFV
HHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]