Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 126698892

GI number: 126698892

Start: 1502404

End: 1503123

Strand: Direct

Name: scpA [H]

Synonym: CD1295

Alternate gene names: 126698892

Gene position: 1502404-1503123 (Clockwise)

Preceding gene: 126698891

Following gene: 126698893

Centisome position: 35.02

GC content: 22.92

Gene sequence:

>720_bases
ATGAAGTATAATATACAATTACAAGTCTATGAGGGACCATTAGATTTACTTTATGATTTAATAACAAAGCATAAAATAGA
TATAAAGGATATATCCATAATAGATATAACTAAGCAGTATCTAAATTATTTGAAAATGCTAGATAAAATGGATTTAGAGA
TAACTAGTGAATTTATAACTATGGCATCAAAACTTTTAGAGATAAAGTCTAAATATCTGCTTTATAAGCAAAAAGATGAA
GAAGAAGACCCAAGAATAGAACTTATGGAAAAGTTAGAAGAATATAGAAAGTTTAAGGTAGCATCACAAGATATAAAAGA
AAATATAACTTATGTTAATGAGAGATTTTATAGAAATAAAGAAGAGATAATTATTGATGACAATGTGGATTTAGAAGATA
TATCAATTGAAGCAATAAAAAATATACTTCCATACATATTTAAAGTTAAAACATCACAGATAGAAAATGCTAATGATGAG
AAACTAGATAAAATAGTAAGGAAGAAAATAATATCTGTAGAAGAAAAAATATTATATATAAGAGATATTATAAAAGAGAA
GATTGAAGTTACTTTTACAAATATTATAAAATCATATGAAAATGATGAAATAATAGCTACTTTTTTATCTATATTAGAGC
TTATAAAAGAAAAAGAAATAGTCGTAGTACAAGATATATTTTTTGATGATATTCTAATAAGAAAAAGTTCGGAGTGTTAA

Upstream 100 bases:

>100_bases
CTGGTATGTATAGAATAATATTAACACCAATATATGCAGTGTTGCTAAAAATAGTATATTTATTTGTTTAATATAATAAA
CAGATTAAAGAGGGATTGAT

Downstream 100 bases:

>100_bases
AATGAAAAGAGAAGATATAAAGTATATTATAGAATCTGTTATGTTTGCATATGGTGAGCCAATAAGTATAAAAGAATTAA
ACTATATAATAAATAAAGAA

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKYNIQLQVYEGPLDLLYDLITKHKIDIKDISIIDITKQYLNYLKMLDKMDLEITSEFITMASKLLEIKSKYLLYKQKDE
EEDPRIELMEKLEEYRKFKVASQDIKENITYVNERFYRNKEEIIIDDNVDLEDISIEAIKNILPYIFKVKTSQIENANDE
KLDKIVRKKIISVEEKILYIRDIIKEKIEVTFTNIIKSYENDEIIATFLSILELIKEKEIVVVQDIFFDDILIRKSSEC

Sequences:

>Translated_239_residues
MKYNIQLQVYEGPLDLLYDLITKHKIDIKDISIIDITKQYLNYLKMLDKMDLEITSEFITMASKLLEIKSKYLLYKQKDE
EEDPRIELMEKLEEYRKFKVASQDIKENITYVNERFYRNKEEIIIDDNVDLEDISIEAIKNILPYIFKVKTSQIENANDE
KLDKIVRKKIISVEEKILYIRDIIKEKIEVTFTNIIKSYENDEIIATFLSILELIKEKEIVVVQDIFFDDILIRKSSEC
>Mature_239_residues
MKYNIQLQVYEGPLDLLYDLITKHKIDIKDISIIDITKQYLNYLKMLDKMDLEITSEFITMASKLLEIKSKYLLYKQKDE
EEDPRIELMEKLEEYRKFKVASQDIKENITYVNERFYRNKEEIIIDDNVDLEDISIEAIKNILPYIFKVKTSQIENANDE
KLDKIVRKKIISVEEKILYIRDIIKEKIEVTFTNIIKSYENDEIIATFLSILELIKEKEIVVVQDIFFDDILIRKSSEC

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 28585; Mature: 28585

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNIQLQVYEGPLDLLYDLITKHKIDIKDISIIDITKQYLNYLKMLDKMDLEITSEFIT
CCEEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MASKLLEIKSKYLLYKQKDEEEDPRIELMEKLEEYRKFKVASQDIKENITYVNERFYRNK
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EEIIIDDNVDLEDISIEAIKNILPYIFKVKTSQIENANDEKLDKIVRKKIISVEEKILYI
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RDIIKEKIEVTFTNIIKSYENDEIIATFLSILELIKEKEIVVVQDIFFDDILIRKSSEC
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYNIQLQVYEGPLDLLYDLITKHKIDIKDISIIDITKQYLNYLKMLDKMDLEITSEFIT
CCEEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MASKLLEIKSKYLLYKQKDEEEDPRIELMEKLEEYRKFKVASQDIKENITYVNERFYRNK
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EEIIIDDNVDLEDISIEAIKNILPYIFKVKTSQIENANDEKLDKIVRKKIISVEEKILYI
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RDIIKEKIEVTFTNIIKSYENDEIIATFLSILELIKEKEIVVVQDIFFDDILIRKSSEC
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]