| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is spo0A [H]
Identifier: 126698810
GI number: 126698810
Start: 1412597
End: 1413421
Strand: Direct
Name: spo0A [H]
Synonym: CD1214
Alternate gene names: 126698810
Gene position: 1412597-1413421 (Clockwise)
Preceding gene: 126698809
Following gene: 126698811
Centisome position: 32.93
GC content: 30.42
Gene sequence:
>825_bases ATGGGGGGATTTTTAGTGGAAAAAATCAAAATAGTTTTAGCAGATGACAATAAGGATTTTTGTCAGGTATTAAAAGAGTA TTTGTCTAATGAAGATGATATCGATATATTAGGCATAGCTAAGGATGGAATTGAAGCATTAGACTTAGTAAAAAAGACAC AACCGGACTTATTAATACTAGATGTAATAATGCCACATCTAGATGGATTAGGTGTAATTGAAAAATTGAATACTATGGAT ATACCTAAAATGCCAAAAATAATAGTACTATCAGCAGTAGGTCAAGATAAGATAACTCAAAGCGCAATAAATCTAGGAGC AGATTACTACATAGTAAAGCCATTTGATTTTGTTGTGTTTATAAACAGAATTAGAGAGCTAGTTTCTAATAGAGTTACAC AAGTTGAGCCAAAACCTAGACCAGTTCAAGAGACTCAAATGACTAGAAGTGATTTTGTTAAGAATGTAGGAAATATAGAG ACAGAAATCACAAATATAATACATGAAATAGGAGTACCAGCTCATATAAAAGGATATTTATATTTAAGAGAAGCAATAAA AATGGTTATTGATAATGTTGAGCTTTTAGGTGCAGTAACAAAAGAGTTATATCCAAGTATAGCTAAAAAATTCAATACAA CACCAAGTAGAGTTGAAAGAGCAATAAGACATGCAATAGAGGTTGCATGGAGTAGAGGAAAAGTTGACACAATAAATCAA TTATTTGGATATACGGTACACAATACTAAAGGAAAACCAACTAATTCAGAATTTATAGCAATGATTGCTGATAAATTAAG ACTAGAACATAGTATGGTTAAATAA
Upstream 100 bases:
>100_bases GAGGAATATAATTTTGGAGTGTCGAATATGCTTTAGAGTAGATAATTAGGAAGCAATTGTGTAAAAAGTTTAGTTTTCTG TAATAAGAAGATGTTTTTTA
Downstream 100 bases:
>100_bases ACAAGACATAAAAAGTAAGGCTTTTTAATTAAGGCATTGGCTATAAATGCGTATTACAAGCAGCGAAACGGTATAACCAC TAGGGTTATACCGTTTCGCT
Product: stage 0 sporulation protein A
Products: protein L-glutamate+ methanol; methanol; Tapglu; methanol; Targlu; Trgglu; Tsrglu; NH3; protein-L-glutamate [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MGGFLVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMD IPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQVEPKPRPVQETQMTRSDFVKNVGNIE TEITNIIHEIGVPAHIKGYLYLREAIKMVIDNVELLGAVTKELYPSIAKKFNTTPSRVERAIRHAIEVAWSRGKVDTINQ LFGYTVHNTKGKPTNSEFIAMIADKLRLEHSMVK
Sequences:
>Translated_274_residues MGGFLVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMD IPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQVEPKPRPVQETQMTRSDFVKNVGNIE TEITNIIHEIGVPAHIKGYLYLREAIKMVIDNVELLGAVTKELYPSIAKKFNTTPSRVERAIRHAIEVAWSRGKVDTINQ LFGYTVHNTKGKPTNSEFIAMIADKLRLEHSMVK >Mature_273_residues GGFLVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDI PKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQVEPKPRPVQETQMTRSDFVKNVGNIET EITNIIHEIGVPAHIKGYLYLREAIKMVIDNVELLGAVTKELYPSIAKKFNTTPSRVERAIRHAIEVAWSRGKVDTINQL FGYTVHNTKGKPTNSEFIAMIADKLRLEHSMVK
Specific function: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the ex
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=110, Percent_Identity=37.2727272727273, Blast_Score=74, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR014879 - InterPro: IPR012052 - InterPro: IPR011991 - ProDom: PD010908 [H]
Pfam domain/function: PF00072 Response_reg; PF08769 Spo0A_C [H]
EC number: 3.1.1.61 [C]
Molecular weight: Translated: 30850; Mature: 30719
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFLVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLIL CCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEH DVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVF HHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECHHHHHHH INRIRELVSNRVTQVEPKPRPVQETQMTRSDFVKNVGNIETEITNIIHEIGVPAHIKGYL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH YLREAIKMVIDNVELLGAVTKELYPSIAKKFNTTPSRVERAIRHAIEVAWSRGKVDTINQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH LFGYTVHNTKGKPTNSEFIAMIADKLRLEHSMVK HHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGFLVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLIL CCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEH DVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVF HHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECHHHHHHH INRIRELVSNRVTQVEPKPRPVQETQMTRSDFVKNVGNIETEITNIIHEIGVPAHIKGYL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH YLREAIKMVIDNVELLGAVTKELYPSIAKKFNTTPSRVERAIRHAIEVAWSRGKVDTINQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH LFGYTVHNTKGKPTNSEFIAMIADKLRLEHSMVK HHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein L-glutamate Omethyl ester; Tapglu-Me; H2O; Targlu-Me; Trgglu-Me; Tsrglu-Me; Tsrgln; Trggln; Targln; Tapgln; protein-L-glutamine [C]
Specific reaction: Protein L-glutamate Omethyl ester + H2O = protein L-glutamate+ methanol H2O + Tapglu-Me = methanol + Tapglu H2O + Targlu-Me = methanol + Targlu H2O + Trgglu-Me = methanol + Trgglu H2O + Tsrglu-Me = methanol + Tsrglu H2O + Tsrgln = NH3 + Tsrglu H2O + Trggl
General reaction: Hydrolysis of carboxylic ester [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA