Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yuiD [H]

Identifier: 126698802

GI number: 126698802

Start: 1404091

End: 1404528

Strand: Direct

Name: yuiD [H]

Synonym: CD1206

Alternate gene names: 126698802

Gene position: 1404091-1404528 (Clockwise)

Preceding gene: 126698801

Following gene: 126698803

Centisome position: 32.73

GC content: 32.88

Gene sequence:

>438_bases
ATGGATTTTTTTTCGGAGATTTTTAACAATGGGGCTTTGGGAATAAGTCTGATTGCTTGTTTCTTAGCACAATTTATAAA
AATATTTACTGGTAAGGAAAAAAGAATTGAGTTATCAAGAATACTTATTTCAGGAGGTATGCCTAGTTCCCATAGTTCTT
TTGTTACAAGTTTAGCTACAGTGGTAGGTATTGAAAAAGGGTTTAATTCTACTGATTTTGCTATAATTACCGTGCTTGCC
TTAATTATAATGTATGATGCAGCAGGTGTTAGACGGGCTGTTGGTAAACAAGCTACTATATTAAATCAAATGGTGGCAGA
TATACAGCATGGAAAGCATATAGAGCAGAAGAAATTAAAAGAATTAATAGGTCATACACCACTAGAAGTTTGGTTTGGAG
CTTTACTTGGAATAGTAACAGCTTTAATATTGATGTAA

Upstream 100 bases:

>100_bases
TAGAAAAATTATCTGATGATGTAGATTTTTTAAAGGGATTGGCTGAATATATAATAGATAGAGAATACTAAAATATACAG
CTAAAATCGAGGAGGGAAAA

Downstream 100 bases:

>100_bases
ATTGAAAATTTACAGAATAAAGGTGAGGATAATATGTATAAATATTTAGATAAAGTAAATTCTCCAAAGAATATAAAAAA
TATGAGTATAGAAGAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLATVVGIEKGFNSTDFAIITVLA
LIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLKELIGHTPLEVWFGALLGIVTALILM

Sequences:

>Translated_145_residues
MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLATVVGIEKGFNSTDFAIITVLA
LIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLKELIGHTPLEVWFGALLGIVTALILM
>Mature_145_residues
MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLATVVGIEKGFNSTDFAIITVLA
LIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLKELIGHTPLEVWFGALLGIVTALILM

Specific function: Unknown

COG id: COG1963

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003832 [H]

Pfam domain/function: PF02681 DUF212 [H]

EC number: NA

Molecular weight: Translated: 15779; Mature: 15779

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLAT
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VVGIEKGFNSTDFAIITVLALIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ELIGHTPLEVWFGALLGIVTALILM
HHHCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLAT
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VVGIEKGFNSTDFAIITVLALIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ELIGHTPLEVWFGALLGIVTALILM
HHHCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]