| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yuiD [H]
Identifier: 126698802
GI number: 126698802
Start: 1404091
End: 1404528
Strand: Direct
Name: yuiD [H]
Synonym: CD1206
Alternate gene names: 126698802
Gene position: 1404091-1404528 (Clockwise)
Preceding gene: 126698801
Following gene: 126698803
Centisome position: 32.73
GC content: 32.88
Gene sequence:
>438_bases ATGGATTTTTTTTCGGAGATTTTTAACAATGGGGCTTTGGGAATAAGTCTGATTGCTTGTTTCTTAGCACAATTTATAAA AATATTTACTGGTAAGGAAAAAAGAATTGAGTTATCAAGAATACTTATTTCAGGAGGTATGCCTAGTTCCCATAGTTCTT TTGTTACAAGTTTAGCTACAGTGGTAGGTATTGAAAAAGGGTTTAATTCTACTGATTTTGCTATAATTACCGTGCTTGCC TTAATTATAATGTATGATGCAGCAGGTGTTAGACGGGCTGTTGGTAAACAAGCTACTATATTAAATCAAATGGTGGCAGA TATACAGCATGGAAAGCATATAGAGCAGAAGAAATTAAAAGAATTAATAGGTCATACACCACTAGAAGTTTGGTTTGGAG CTTTACTTGGAATAGTAACAGCTTTAATATTGATGTAA
Upstream 100 bases:
>100_bases TAGAAAAATTATCTGATGATGTAGATTTTTTAAAGGGATTGGCTGAATATATAATAGATAGAGAATACTAAAATATACAG CTAAAATCGAGGAGGGAAAA
Downstream 100 bases:
>100_bases ATTGAAAATTTACAGAATAAAGGTGAGGATAATATGTATAAATATTTAGATAAAGTAAATTCTCCAAAGAATATAAAAAA TATGAGTATAGAAGAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLATVVGIEKGFNSTDFAIITVLA LIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLKELIGHTPLEVWFGALLGIVTALILM
Sequences:
>Translated_145_residues MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLATVVGIEKGFNSTDFAIITVLA LIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLKELIGHTPLEVWFGALLGIVTALILM >Mature_145_residues MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLATVVGIEKGFNSTDFAIITVLA LIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLKELIGHTPLEVWFGALLGIVTALILM
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 15779; Mature: 15779
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLAT CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VVGIEKGFNSTDFAIITVLALIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLK HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ELIGHTPLEVWFGALLGIVTALILM HHHCCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLAT CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VVGIEKGFNSTDFAIITVLALIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLK HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ELIGHTPLEVWFGALLGIVTALILM HHHCCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]