Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is spoIIIAB

Identifier: 126698789

GI number: 126698789

Start: 1395249

End: 1395770

Strand: Direct

Name: spoIIIAB

Synonym: CD1193

Alternate gene names: NA

Gene position: 1395249-1395770 (Clockwise)

Preceding gene: 126698788

Following gene: 126698790

Centisome position: 32.52

GC content: 24.9

Gene sequence:

>522_bases
TTGCAAATTAAAATAATTATTATAGCTTTCTTGATAGGAAGTAGTTATTTGATAGGTGAACAAATATACAAAACTTATAC
TCGTAGACATAAACAATTAAACGATTTAATAAGAGTTTTAGAAATTTTGAGGATGGATTTATCTTTTGGACTTTATACAT
TAGAAGAAATCTTTAATAGGATAGGTGGAAATAAAGAGTTTTGTTTTTGGAAATTTTTCTATCAAATATCAGAAGGACTT
CACAATGAACAAAGTAAAACTTTGGAAATAATAATATCAGAAAATATTGATGTCTTAAGTAAAGAAACTTATCTAGGCAA
TAAAGAAATTGAGGAACTGAAAAATCTAATACTTACTTTAGGGAAAAGCGATATAGAGTCACAACAAAGAATGATAGATT
TATCTATAGAAAATTTGAAAAAACAAACCTATGAGACAAAGGAAGATATAAACAAAAAAGGCGTATTGTATAAAAAATTA
GTGACATTCATAGGTATAGGTATATGTATTATATTGATTTAA

Upstream 100 bases:

>100_bases
CTGGATAAAGAGTTATTTAAAAAGGTTATAATTCTTTCTGCAAAAAGAGGAGCAGGAACAATTGAAAAAATTTATGATTT
AGAAGAAAAGAGATGGTATT

Downstream 100 bases:

>100_bases
TATGGGGAGGTTTATTATGGAAATATCATTGATATTAAAGGTTGCAGGTGTCGGTATTCTAATATCAGTATTGAATATGA
TATTGGAAAAAACAGATAGA

Product: stage III sporulation protein AB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQIKIIIIAFLIGSSYLIGEQIYKTYTRRHKQLNDLIRVLEILRMDLSFGLYTLEEIFNRIGGNKEFCFWKFFYQISEGL
HNEQSKTLEIIISENIDVLSKETYLGNKEIEELKNLILTLGKSDIESQQRMIDLSIENLKKQTYETKEDINKKGVLYKKL
VTFIGIGICIILI

Sequences:

>Translated_173_residues
MQIKIIIIAFLIGSSYLIGEQIYKTYTRRHKQLNDLIRVLEILRMDLSFGLYTLEEIFNRIGGNKEFCFWKFFYQISEGL
HNEQSKTLEIIISENIDVLSKETYLGNKEIEELKNLILTLGKSDIESQQRMIDLSIENLKKQTYETKEDINKKGVLYKKL
VTFIGIGICIILI
>Mature_173_residues
MQIKIIIIAFLIGSSYLIGEQIYKTYTRRHKQLNDLIRVLEILRMDLSFGLYTLEEIFNRIGGNKEFCFWKFFYQISEGL
HNEQSKTLEIIISENIDVLSKETYLGNKEIEELKNLILTLGKSDIESQQRMIDLSIENLKKQTYETKEDINKKGVLYKKL
VTFIGIGICIILI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20262; Mature: 20262

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKIIIIAFLIGSSYLIGEQIYKTYTRRHKQLNDLIRVLEILRMDLSFGLYTLEEIFNR
CEEEHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGNKEFCFWKFFYQISEGLHNEQSKTLEIIISENIDVLSKETYLGNKEIEELKNLILTL
HCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHH
GKSDIESQQRMIDLSIENLKKQTYETKEDINKKGVLYKKLVTFIGIGICIILI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQIKIIIIAFLIGSSYLIGEQIYKTYTRRHKQLNDLIRVLEILRMDLSFGLYTLEEIFNR
CEEEHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGNKEFCFWKFFYQISEGLHNEQSKTLEIIISENIDVLSKETYLGNKEIEELKNLILTL
HCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHH
GKSDIESQQRMIDLSIENLKKQTYETKEDINKKGVLYKKLVTFIGIGICIILI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA