Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is spoIIIAA [H]

Identifier: 126698788

GI number: 126698788

Start: 1394291

End: 1395259

Strand: Direct

Name: spoIIIAA [H]

Synonym: CD1192

Alternate gene names: 126698788

Gene position: 1394291-1395259 (Clockwise)

Preceding gene: 126698787

Following gene: 126698789

Centisome position: 32.5

GC content: 28.9

Gene sequence:

>969_bases
ATGAATAAACTTTCTGATGAAATAATAAACTCTCTTTCTACAACTATAAGAGAAAAGGTAGAAAAAGTCTCAAACAATAA
TCTGAACATAGAAGAAATTAGGTTACGCTCACAAAAACCATTGATACTAAATGCAAACTCTAAAGATTATTTTTACAATC
AAAAAACTATGACACTTGATTTAAATCAACAAAACTCATATGTAGTAACAAGAGAAGATGTAGAGCAAACTTTTCAAATA
ATATGTAAATATTCAATACATTCATTTATGGATGACATAAAAAAAGGATTCATAACTTTGAGAGGAGGTCATAGAGTAGG
GTTAGTTGGAAAAGCAATAGTAGAAGATGGACAAGTCAAAAATATAAAGCATATATCATCTTTAAATATAAGGGTATCAA
GGGAAATTATTGGATGCTCGGATAAGATTTTAAGTCATATCATAAAGGGAAAAAATCAGATTAATAATACTTTGATAATA
TCACCACCTCAATGTGGAAAAACAACTTTAATAAGAGATATAGTAAGAAATTTAAGTAATGGTAATGAAGATTATGGATT
TAAAGGTTTAAAAGTGGCTTTAGTAGATGAGCGTAATGAGATAGCAGGAGCTTATCTAGGTGTTCCACAAATGGATGTGG
GAATAAGGACTGATATAATAGAAACTTGCCCAAAAGACTTGGGTATTACAATGCTTTTAAGGTCTATGTCACCAAATGTT
ATTGTGACAGATGAAATTGGAAGTGAAAAAGAAATAAAGGCATTATACACAGCATTAAATGGAGGTATAGGATTAATAAC
TACTGTGCATGGAGATTCAATAGAGGATATACAAAATAGAAAAGAATTAAATAGACTTCTGGATAAAGAGTTATTTAAAA
AGGTTATAATTCTTTCTGCAAAAAGAGGAGCAGGAACAATTGAAAAAATTTATGATTTAGAAGAAAAGAGATGGTATTTT
GCAAATTAA

Upstream 100 bases:

>100_bases
TTTTTTTATTTATAAACATTATTAAAAAAATATAGATGTTTTGGTTATATTCCTTGTCCTTTATAAATAGAATTATATAA
ACAAAGGAGGAGGACAAGAG

Downstream 100 bases:

>100_bases
AATAATTATTATAGCTTTCTTGATAGGAAGTAGTTATTTGATAGGTGAACAAATATACAAAACTTATACTCGTAGACATA
AACAATTAAACGATTTAATA

Product: stage III sporulation protein AA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNKLSDEIINSLSTTIREKVEKVSNNNLNIEEIRLRSQKPLILNANSKDYFYNQKTMTLDLNQQNSYVVTREDVEQTFQI
ICKYSIHSFMDDIKKGFITLRGGHRVGLVGKAIVEDGQVKNIKHISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLII
SPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGIRTDIIETCPKDLGITMLLRSMSPNV
IVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDIQNRKELNRLLDKELFKKVIILSAKRGAGTIEKIYDLEEKRWYF
AN

Sequences:

>Translated_322_residues
MNKLSDEIINSLSTTIREKVEKVSNNNLNIEEIRLRSQKPLILNANSKDYFYNQKTMTLDLNQQNSYVVTREDVEQTFQI
ICKYSIHSFMDDIKKGFITLRGGHRVGLVGKAIVEDGQVKNIKHISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLII
SPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGIRTDIIETCPKDLGITMLLRSMSPNV
IVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDIQNRKELNRLLDKELFKKVIILSAKRGAGTIEKIYDLEEKRWYF
AN
>Mature_322_residues
MNKLSDEIINSLSTTIREKVEKVSNNNLNIEEIRLRSQKPLILNANSKDYFYNQKTMTLDLNQQNSYVVTREDVEQTFQI
ICKYSIHSFMDDIKKGFITLRGGHRVGLVGKAIVEDGQVKNIKHISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLII
SPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGIRTDIIETCPKDLGITMLLRSMSPNV
IVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDIQNRKELNRLLDKELFKKVIILSAKRGAGTIEKIYDLEEKRWYF
AN

Specific function: Unknown

COG id: COG3854

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014217 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36294; Mature: 36294

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLSDEIINSLSTTIREKVEKVSNNNLNIEEIRLRSQKPLILNANSKDYFYNQKTMTLD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCEEEECCCCCEEECCEEEEEE
LNQQNSYVVTREDVEQTFQIICKYSIHSFMDDIKKGFITLRGGHRVGLVGKAIVEDGQVK
ECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEHHHHHCCCCCC
NIKHISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSN
CHHHHHHCCEEEEHHHHCCHHHHHHHHHHCCHHCCCEEEECCCCCCHHHHHHHHHHHHCC
GNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGIRTDIIETCPKDLGITMLLRSMSPNV
CCCCCCCCCEEEEEECCCCHHHHHEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCE
IVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDIQNRKELNRLLDKELFKKVIILSA
EEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC
KRGAGTIEKIYDLEEKRWYFAN
CCCCCHHHHHHHHHHCCEECCC
>Mature Secondary Structure
MNKLSDEIINSLSTTIREKVEKVSNNNLNIEEIRLRSQKPLILNANSKDYFYNQKTMTLD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCEEEECCCCCEEECCEEEEEE
LNQQNSYVVTREDVEQTFQIICKYSIHSFMDDIKKGFITLRGGHRVGLVGKAIVEDGQVK
ECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEHHHHHCCCCCC
NIKHISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSN
CHHHHHHCCEEEEHHHHCCHHHHHHHHHHCCHHCCCEEEECCCCCCHHHHHHHHHHHHCC
GNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGIRTDIIETCPKDLGITMLLRSMSPNV
CCCCCCCCCEEEEEECCCCHHHHHEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCE
IVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDIQNRKELNRLLDKELFKKVIILSA
EEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC
KRGAGTIEKIYDLEEKRWYFAN
CCCCCHHHHHHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766372; 8969508; 9384377 [H]