Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698526

Identifier: 126698526

GI number: 126698526

Start: 1115979

End: 1117472

Strand: Direct

Name: 126698526

Synonym: CD0946

Alternate gene names: NA

Gene position: 1115979-1117472 (Clockwise)

Preceding gene: 126698525

Following gene: 126698527

Centisome position: 26.01

GC content: 29.38

Gene sequence:

>1494_bases
ATGAAACATAAAGATTATTGGAGGAAGAGATTTGAACAATTAGAAGAAGCTCAGAATAATAAAAGTATAAAATATTATCT
TGAATTAGAAAAACAATATAAACTAGCAATGTCTAATATAGAAAGAGATATACTTATATGGTATAACAGATTCACTGAAA
ATGAGGGAATATCTTTATTGGAAGCTAAGAAACTGCTAAATACAAGAGAACTAGAAGAGTTTAAATGGAGTGTAGAAGAA
TATATTAAATATGGTAAAGAAAATGCTATAAATCAAAAGTGGATGAAAGAGTTAGAAAATGCTAGTGCAAGAGTTCATAT
AACAAGGCTTGAAGCTTTAAAACTGCAAATACAGCAACAAGTAGAAGTTTTATATGGAAATGAACTTGATGGTATTGATA
AACTAATGAGAGATATTTATACAAGTGGATACTATCATACAGCTTTTAATGTTCAACAAGGAGTAAACGTTGGTTGGAGT
TTAATGAGTCTTGATACTAACAGAATAAATAAAGTTATTTCTAAGCCTTGGACTAGTGATGGATTAAACTTCAGTGAAAG
GATTTGGGGTAAGCATAGACCTGCTTTAGTAAATGAATTACATACTAAGCTAACTCAATCAATTATTAGAGGTGAAAATC
CAAAGAAGCTAGTAAATGACTTTGCTAAGAGATTTAAGGTATCTAAGTCACAAGCTAAGAACTTAATAATGACTGAATCA
GCTTTCTTTGCATCAGCTTCAAGAAAAGATTGTTTTAATGATTTAGATGTAGAGAAATATGAGATTATTGCTACATTAGA
TTTAAGAACTTCAAATATATGCAGAGAGTTAGATGGAAAAATATTTGATATGAAAGATTATCAAGTTGGAATAACAGCTC
CACCATTTCATTGTCGTTGTAGGACAACAACAGCTCCTTGGTTCGAGGATGAAGAAGGCTATAGAGCAGCAAGAGGAGAA
GATGGAAAAACATATTATGTACCATCTAGTATGAAGTATAATGAGTGGTATGAGAAGTATGTTAAAAATAATAGTAAACA
AACTGGTGCAAAATATACTAAAGGTGATATCGAGTGGAATATAAGAAGAGAAGAAGAAGCAGAACTATATTACGATAATA
TTAGAAATAGAAAAGATGATATTTCCAAAATATCAAAGAATACAAATTGGTCAGAAAAAAGTATAGGTCAAATTAAAAAT
CATATTTTCTACAATACTCATATAATGAGAGATGGAACTAGACGTATGTTGGATTCTGACTATAGTATGTCAGTTGCTTG
GCAAAGACTTATAAATGGTACATACGAAGATATTGATATTCTCTTATTAAAACATGAATACCTTGAAAGTATATTTGAGA
AAAAGTATAATATAAGTAACTTAGAAGCCCATAGAATGACTGAGAAAAAGCATGATTGGTATAAAGAATTAATTAAACAG
AAAGGAGAGTTTGAAGAAGATGATTGTCTTAATGAACTTATTAGAAAAGAATAA

Upstream 100 bases:

>100_bases
GTCGAGGATGTTAATGACGAACTTGAAAGACTTAAAAAACAGGAAGATACTCAAAAAGAGTATGATGATTTAATTCCTAA
TAATCAAGATGGTGTTATAG

Downstream 100 bases:

>100_bases
TGAATATGTTATATATAGTTATGGATATGAAGAAAATAAGCTTGATGGAAGAATAAAAATATATTTAGATGATTTTTATA
ATTATGAAATAATAAAAGAG

Product: phage minor head protein

Products: NA

Alternate protein names: SPP1 Family Phage Head Morphogenesis Protein; Prophage Head Protein; Phage Head Morphogenesis Protein SPP1 Gp7 Family; NAD+-Asparagine ADP-Ribosyltransferase; Phage Mu Protein F Like Protein; Phage Minor Head Protein; SPP1 Gp7 Family Phage Head Morphogenesis Protein; Prophage Minor Head Protein; Minor Head Protein; Phage Head Morphogenesis Protein SPP1 Gp7 Family

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLLEAKKLLNTRELEEFKWSVEE
YIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWS
LMSLDTNRINKVISKPWTSDGLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES
AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARGE
DGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWNIRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKN
HIFYNTHIMRDGTRRMLDSDYSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ
KGEFEEDDCLNELIRKE

Sequences:

>Translated_497_residues
MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLLEAKKLLNTRELEEFKWSVEE
YIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWS
LMSLDTNRINKVISKPWTSDGLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES
AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARGE
DGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWNIRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKN
HIFYNTHIMRDGTRRMLDSDYSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ
KGEFEEDDCLNELIRKE
>Mature_497_residues
MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLLEAKKLLNTRELEEFKWSVEE
YIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWS
LMSLDTNRINKVISKPWTSDGLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES
AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARGE
DGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWNIRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKN
HIFYNTHIMRDGTRRMLDSDYSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ
KGEFEEDDCLNELIRKE

Specific function: Unknown

COG id: COG5585

COG function: function code T; NAD+--asparagine ADP-ribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59243; Mature: 59243

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLL
CCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCEEEEEEHHCCCCCCHHH
EAKKLLNTRELEEFKWSVEEYIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
VEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWSLMSLDTNRINKVISKPWTSD
HHHHCCCCCCHHHHHHHHHHHCCEEEEEECHHHCCCCCEEEEECCHHHHHHHHCCCCCCC
GLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCEEEECH
AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRC
HHHHCCCHHHHCCCCCCCEEEEEEEEECCHHHHHHHHCCCEEECCCCEEECCCCCCEEEE
RTTTAPWFEDEEGYRAARGEDGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWN
ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE
IRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKNHIFYNTHIMRDGTRRMLDSD
ECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHCCC
YSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ
CHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KGEFEEDDCLNELIRKE
CCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLL
CCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCEEEEEEHHCCCCCCHHH
EAKKLLNTRELEEFKWSVEEYIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
VEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWSLMSLDTNRINKVISKPWTSD
HHHHCCCCCCHHHHHHHHHHHCCEEEEEECHHHCCCCCEEEEECCHHHHHHHHCCCCCCC
GLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCEEEECH
AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRC
HHHHCCCHHHHCCCCCCCEEEEEEEEECCHHHHHHHHCCCEEECCCCEEECCCCCCEEEE
RTTTAPWFEDEEGYRAARGEDGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWN
ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE
IRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKNHIFYNTHIMRDGTRRMLDSD
ECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHCCC
YSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ
CHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KGEFEEDDCLNELIRKE
CCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA