Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698506

Identifier: 126698506

GI number: 126698506

Start: 1104178

End: 1105173

Strand: Direct

Name: 126698506

Synonym: CD0929

Alternate gene names: NA

Gene position: 1104178-1105173 (Clockwise)

Preceding gene: 126698505

Following gene: 126698507

Centisome position: 25.74

GC content: 26.41

Gene sequence:

>996_bases
ATGATAATGCACAAATTTATAATACATGTTTTAGATAAGAATAGTGATACACCAATATTGAATGATTTTGAAGGTAGGGT
TAATCAAGATATGGTCCTATTTTTTCAAAAGAAAATAAGCAAAGTATCAAGAGATAATGATATCAGAACAGCAGTATTTA
ATGACTATAGTAACAATCTAATTAAGAAGTGTTGTGAACAAATTATTTATGATGAAAGTTCATTTTTAAATAACTCTAAA
GAGATTGCAGCTTATTTATTTGATGTTATGAAGCTTAATGCTACATTAGAATCTTGCGACTTATCAATTTGCTTATACTC
TCAAAAAGATGAAAAGAAAGTTGCTATATTAAAGCTTGATTACAATAATTCGTATACTCATTCAATTGAGTTTAAAGATG
ATAAATTTAATATACAGATGTCTAAAAATGAAATTAATATACAAGAGACTAAAGCAATTAAAATTGGTGCATTGATTGGA
TTAAGTGGAATTAATGACGAATATCATCTAAAAGTATTGGATAAAGATGCAGAGAAGGAAGAAGCTAATTCTAAGTTTGT
TACAGAGTTTCTAAATGCTACTAAAGTGAAAGATGATAAGTATAAGACTAAGATGTTTAAAGCTTTTGTGGACTCTTATA
TAGCACATTTATATAGTGATATGAAGCAGGGCGAAGATGTAAGAGGAATGTTACTTTATATGTTAAGAGAAAAACAAAAA
CTTGATATAAATGAGTTTGCTGATAAGGCGATAAAGGATGATTTAAAAGATAGTTTTAAGGACCATATAGAAGAAAAAGG
GATTGAAAGTTTTAATATTGATAAAAAATGGGTTGAAAAGAATTTAAAAAATAGACATATAAAAACGGATACAGGTTTTG
AGATAAAAGGTAAAATGGAGGATTTTGAGGATTTTATGAAATATGGTATTAGACATAATGGAAATGGAACTGTAGATATA
GTTATTAAAAATGTTAATTTATATAATGAGAAGTAG

Upstream 100 bases:

>100_bases
ATATAGTACTAATAACTATAGATAAGGTAGATGAAGTTATAAAAAATACTATAAGCGAGAAGATTATAGAACGCTTTAAA
AATTTATAAGGGGTGAAATT

Downstream 100 bases:

>100_bases
GTGCTCATATGAAATATGTAGCTAGTTTTAGTGGAGGAAAAGATTCAGCAGCAATGCTCCTTTTAATATTAGAAAAAAGG
CTTCTGTTAGACGAGATTGT

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MIMHKFIIHVLDKNSDTPILNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYSNNLIKKCCEQIIYDESSFLNNSK
EIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAILKLDYNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIG
LSGINDEYHLKVLDKDAEKEEANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYIAHLYSDMKQGEDVRGMLLYMLREKQK
LDINEFADKAIKDDLKDSFKDHIEEKGIESFNIDKKWVEKNLKNRHIKTDTGFEIKGKMEDFEDFMKYGIRHNGNGTVDI
VIKNVNLYNEK

Sequences:

>Translated_331_residues
MIMHKFIIHVLDKNSDTPILNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYSNNLIKKCCEQIIYDESSFLNNSK
EIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAILKLDYNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIG
LSGINDEYHLKVLDKDAEKEEANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYIAHLYSDMKQGEDVRGMLLYMLREKQK
LDINEFADKAIKDDLKDSFKDHIEEKGIESFNIDKKWVEKNLKNRHIKTDTGFEIKGKMEDFEDFMKYGIRHNGNGTVDI
VIKNVNLYNEK
>Mature_331_residues
MIMHKFIIHVLDKNSDTPILNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYSNNLIKKCCEQIIYDESSFLNNSK
EIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAILKLDYNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIG
LSGINDEYHLKVLDKDAEKEEANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYIAHLYSDMKQGEDVRGMLLYMLREKQK
LDINEFADKAIKDDLKDSFKDHIEEKGIESFNIDKKWVEKNLKNRHIKTDTGFEIKGKMEDFEDFMKYGIRHNGNGTVDI
VIKNVNLYNEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38663; Mature: 38663

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMHKFIIHVLDKNSDTPILNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYSNNL
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHH
IKKCCEQIIYDESSFLNNSKEIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAILKLD
HHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCCCEEEEEEEE
YNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIGLSGINDEYHLKVLDKDAEKE
CCCCEEEEEEECCCEEEEEECCCCCCEEHHCEEEEEEEEEECCCCCCEEEEEECCCCCHH
EANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYIAHLYSDMKQGEDVRGMLLYMLREKQK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LDINEFADKAIKDDLKDSFKDHIEEKGIESFNIDKKWVEKNLKNRHIKTDTGFEIKGKME
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCHH
DFEDFMKYGIRHNGNGTVDIVIKNVNLYNEK
HHHHHHHHCCEECCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MIMHKFIIHVLDKNSDTPILNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYSNNL
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHH
IKKCCEQIIYDESSFLNNSKEIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAILKLD
HHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCCCEEEEEEEE
YNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIGLSGINDEYHLKVLDKDAEKE
CCCCEEEEEEECCCEEEEEECCCCCCEEHHCEEEEEEEEEECCCCCCEEEEEECCCCCHH
EANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYIAHLYSDMKQGEDVRGMLLYMLREKQK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LDINEFADKAIKDDLKDSFKDHIEEKGIESFNIDKKWVEKNLKNRHIKTDTGFEIKGKME
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCHH
DFEDFMKYGIRHNGNGTVDIVIKNVNLYNEK
HHHHHHHHCCEECCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA