| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698507
Identifier: 126698507
GI number: 126698507
Start: 1105182
End: 1105907
Strand: Direct
Name: 126698507
Synonym: CD0930
Alternate gene names: NA
Gene position: 1105182-1105907 (Clockwise)
Preceding gene: 126698506
Following gene: 126698508
Centisome position: 25.76
GC content: 32.78
Gene sequence:
>726_bases ATGAAATATGTAGCTAGTTTTAGTGGAGGAAAAGATTCAGCAGCAATGCTCCTTTTAATATTAGAAAAAAGGCTTCTGTT AGACGAGATTGTTTTTATAGATACAGGACTAGAATTTAAAGAAATTTATGATATAATAGATGATTTTGAGAAAAGAATAA ACTTTAAAATAACAAGAATTAAAGCAGAAAAAACCTTTGAAGAATACTTTTATACTGTTAATAAACAAGGTAAGCGTAAA GGGCAAATATGGGGTTTTCCATACACCTTGGGAGCATGGTGTAATAGCAGATTAAAACTTGCTCCTGCTAATAAATATTT CAATTCGATTGGAGAACACAAGCGATATATCGGAATCGCTTTTGATGAACCTAGCAGATACAGAAGGCTAGAAAAAAACT GCATAGCACCGCTTTACGAAGCAAAAATGACTGAAAAAGATTGCTTGAAGTATTTAGAAAAAAAAGGATTTTACTATGAT ATACATCACAGATTCAAGAGAACTGGTTGCTATTTGTGTCCTAAGCAAAGTTTAGATAGCCTCAGAACTTTAAGGAAATA CTATCCTGATTTGTGGGCGGGTATGCTTAAATTGGATAAAGATAGTCCAACGACTTTTAGAGCAGACGGAACTACAGTAC ATGACTTAGAAAAGCGATTTAGAAATGAAGATATAGAAAATGAAAGACAGATAAGTTTCTTTCAAACAGAGAAGGTGAGC ATATGA
Upstream 100 bases:
>100_bases TTGAGGATTTTATGAAATATGGTATTAGACATAATGGAAATGGAACTGTAGATATAGTTATTAAAAATGTTAATTTATAT AATGAGAAGTAGGTGCTCAT
Downstream 100 bases:
>100_bases CTAATAAAGAAATGTGCAAGTCAAATAATCTTGATGAAAGAGAAGTGTGTAAGAGTTTTGGGAAAGAGATTTGTGCTAGT TGTATAAATGATAAAGGAGA
Product: phage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MKYVASFSGGKDSAAMLLLILEKRLLLDEIVFIDTGLEFKEIYDIIDDFEKRINFKITRIKAEKTFEEYFYTVNKQGKRK GQIWGFPYTLGAWCNSRLKLAPANKYFNSIGEHKRYIGIAFDEPSRYRRLEKNCIAPLYEAKMTEKDCLKYLEKKGFYYD IHHRFKRTGCYLCPKQSLDSLRTLRKYYPDLWAGMLKLDKDSPTTFRADGTTVHDLEKRFRNEDIENERQISFFQTEKVS I
Sequences:
>Translated_241_residues MKYVASFSGGKDSAAMLLLILEKRLLLDEIVFIDTGLEFKEIYDIIDDFEKRINFKITRIKAEKTFEEYFYTVNKQGKRK GQIWGFPYTLGAWCNSRLKLAPANKYFNSIGEHKRYIGIAFDEPSRYRRLEKNCIAPLYEAKMTEKDCLKYLEKKGFYYD IHHRFKRTGCYLCPKQSLDSLRTLRKYYPDLWAGMLKLDKDSPTTFRADGTTVHDLEKRFRNEDIENERQISFFQTEKVS I >Mature_241_residues MKYVASFSGGKDSAAMLLLILEKRLLLDEIVFIDTGLEFKEIYDIIDDFEKRINFKITRIKAEKTFEEYFYTVNKQGKRK GQIWGFPYTLGAWCNSRLKLAPANKYFNSIGEHKRYIGIAFDEPSRYRRLEKNCIAPLYEAKMTEKDCLKYLEKKGFYYD IHHRFKRTGCYLCPKQSLDSLRTLRKYYPDLWAGMLKLDKDSPTTFRADGTTVHDLEKRFRNEDIENERQISFFQTEKVS I
Specific function: Unknown
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR002478 - InterPro: IPR015947 - InterPro: IPR014729 - InterPro: IPR004521 [H]
Pfam domain/function: PF01507 PAPS_reduct; PF01472 PUA [H]
EC number: NA
Molecular weight: Translated: 28614; Mature: 28614
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVASFSGGKDSAAMLLLILEKRLLLDEIVFIDTGLEFKEIYDIIDDFEKRINFKITRI CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEE KAEKTFEEYFYTVNKQGKRKGQIWGFPYTLGAWCNSRLKLAPANKYFNSIGEHKRYIGIA EHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEECCHHHHHHHHHCCCEEEEEE FDEPSRYRRLEKNCIAPLYEAKMTEKDCLKYLEKKGFYYDIHHRFKRTGCYLCPKQSLDS ECCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCEEEHHHHHHHCCCEECCHHHHHH LRTLRKYYPDLWAGMLKLDKDSPTTFRADGTTVHDLEKRFRNEDIENERQISFFQTEKVS HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCHHEEEEECCCCC I C >Mature Secondary Structure MKYVASFSGGKDSAAMLLLILEKRLLLDEIVFIDTGLEFKEIYDIIDDFEKRINFKITRI CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEE KAEKTFEEYFYTVNKQGKRKGQIWGFPYTLGAWCNSRLKLAPANKYFNSIGEHKRYIGIA EHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEECCHHHHHHHHHCCCEEEEEE FDEPSRYRRLEKNCIAPLYEAKMTEKDCLKYLEKKGFYYDIHHRFKRTGCYLCPKQSLDS ECCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCEEEHHHHHHHCCCEECCHHHHHH LRTLRKYYPDLWAGMLKLDKDSPTTFRADGTTVHDLEKRFRNEDIENERQISFFQTEKVS HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCHHEEEEECCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]