Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698493

Identifier: 126698493

GI number: 126698493

Start: 1097768

End: 1098283

Strand: Direct

Name: 126698493

Synonym: CD0916

Alternate gene names: NA

Gene position: 1097768-1098283 (Clockwise)

Preceding gene: 126698492

Following gene: 126698494

Centisome position: 25.59

GC content: 27.13

Gene sequence:

>516_bases
ATGAGTACTTTATATGAATTAACTACAGATTTATTAGAAATAGAAGAAGGTTTAACAGAAATAACAGGAAATGAAGCTGA
AAAACTAGAGGAAATAAAAGAAATAATAAAACAAGAGATACAAAATAAAAACACTAGAATAGTGTCAGTAATAATAAATA
TCGATAGTGATATAAACTCTATAGATTCAGAGATTAAAAGATTACAAGAGTTAAAGAGGGTCAAAAAGAATACTATTGAT
AGATTAAAAAGCAATATAAAAGACTGTATGGAATTACTTGGGACTAAAAAAGTAGAAACAATTTTAGGAAACATAAGTAT
AAGAAAGTCAGCAGGTAGCTTAGTCATAGAAGATGAGGAAAAGATACCTGCTATATATAAAACAGTAGAGCAAGTTGTAA
AAGTAGATAAAAATAGTATTAAAGACTTTATTAAAAAAGGTCATGAGGTTGAAGGTTGCAGGATTGAATATGGAACTACA
CTAACAATTCCAAAAGCTAAAAAAGAGGTGAATTAA

Upstream 100 bases:

>100_bases
TAGATGTGCAGATATAAGAAAAGAGCCTATAGCGAGGCTCAATTCAAAAATAGAAGTAAAAAATTTATTAAAATAATTAT
AGCATAAACGGAGGGAAATT

Downstream 100 bases:

>100_bases
TATGAATAACAAGGCTTTAGAATTAGCAACATGTACCTTAGAATCAGGTCAAATACTTGATTACATGACAGTAAAGAATT
ACTTAGTAAGTGGAAATGGA

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSTLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIINIDSDINSIDSEIKRLQELKRVKKNTID
RLKSNIKDCMELLGTKKVETILGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNSIKDFIKKGHEVEGCRIEYGTT
LTIPKAKKEVN

Sequences:

>Translated_171_residues
MSTLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIINIDSDINSIDSEIKRLQELKRVKKNTID
RLKSNIKDCMELLGTKKVETILGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNSIKDFIKKGHEVEGCRIEYGTT
LTIPKAKKEVN
>Mature_170_residues
STLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIINIDSDINSIDSEIKRLQELKRVKKNTIDR
LKSNIKDCMELLGTKKVETILGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNSIKDFIKKGHEVEGCRIEYGTTL
TIPKAKKEVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19429; Mature: 19298

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIINIDSDINS
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHH
IDSEIKRLQELKRVKKNTIDRLKSNIKDCMELLGTKKVETILGNISIRKSAGSLVIEDEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCCEEEECCH
KIPAIYKTVEQVVKVDKNSIKDFIKKGHEVEGCRIEYGTTLTIPKAKKEVN
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEECCCHHCCCC
>Mature Secondary Structure 
STLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIINIDSDINS
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHH
IDSEIKRLQELKRVKKNTIDRLKSNIKDCMELLGTKKVETILGNISIRKSAGSLVIEDEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCCEEEECCH
KIPAIYKTVEQVVKVDKNSIKDFIKKGHEVEGCRIEYGTTLTIPKAKKEVN
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA