Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698485

Identifier: 126698485

GI number: 126698485

Start: 1094548

End: 1095342

Strand: Direct

Name: 126698485

Synonym: CD0908

Alternate gene names: NA

Gene position: 1094548-1095342 (Clockwise)

Preceding gene: 126698484

Following gene: 126698486

Centisome position: 25.51

GC content: 28.81

Gene sequence:

>795_bases
ATGAATAACTTACAAGTAATAGAAAGAAATAACGAAAGAGTTTTAACTACACAGCAACTAGCAGATGTATATGAAACTGA
TGTAAATAATATACAAGCTAATTTTAACAGAAACAAAGATAGATTTAAGGAAAATATACACTATTTTTTATTGCAAGGCG
AGTATCTCAAAGAGTTTAAAAACCAACCTACTAATAGTCAGTTGGTTTCAAAACATTCTAGTCAATTATATCTTTGGACT
GAAAGAGGAGCAAATAGACACTGCAAAATATTGGACACTGATAAAGCTTGGGAGCAGTTTGATAACTTAGAAGAAACATA
TTTCAAAGTTAAGCAACATAAGCCAACTTGTATAGAAGATGTATTAATAGAAAGTTTAAAAGAAATGAAAGATTTAAGAC
TTCAAGTTAATCAAGCAAATAGCATTGCTTTAGAAGCAAAGACAGAGGTTGAAACAATAAAAGATGTAGTTTCATTAGAC
TCAAATAGTTGGAGAACAAATACACATCAACTAATTGCAAGAATAGCAAAAAAACAAGGTGGTTTTGAACATATAAATAT
GCTTAGAACAGAAAGTTATGAATTATTAAATAAGAGATTTGGAGTTGACCTACATAGAAGATTAATCAATAAAAGAAGAA
AAATGGCAGAAGAAGGTGTATCTGAATCTAAAAGAGAGAAAGTTAACAATTTAGATGTAATACAAGATGATAAGAAGCTA
ATAGAGGGGTATGTGGCTATTGTAAAAGATATGGCTTTAAAATATGGAATATCAAGTGATTTAAGCAAAAATTAG

Upstream 100 bases:

>100_bases
AGGATTTTTGGAGAAATTTAAAAATACATTCCCAAATGAAGATATGAACATTTTTTTTAAACAATAATATCACTTAAAGT
GATGTAAGGAGGATTATAAA

Downstream 100 bases:

>100_bases
GTTAAATCATAACAGTACCTTGAAAATTAAATACAGAATATTTTGAAAAGGAGTGGTTAAATTGAATAAAGAAAAAATGG
CAGAATTTTATTCTTCAAAA

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFKNQPTNSQLVSKHSSQLYLWT
ERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIEDVLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLD
SNSWRTNTHQLIARIAKKQGGFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL
IEGYVAIVKDMALKYGISSDLSKN

Sequences:

>Translated_264_residues
MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFKNQPTNSQLVSKHSSQLYLWT
ERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIEDVLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLD
SNSWRTNTHQLIARIAKKQGGFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL
IEGYVAIVKDMALKYGISSDLSKN
>Mature_264_residues
MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFKNQPTNSQLVSKHSSQLYLWT
ERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIEDVLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLD
SNSWRTNTHQLIARIAKKQGGFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL
IEGYVAIVKDMALKYGISSDLSKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30990; Mature: 30990

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFK
CCCCEEEECCCCEEEHHHHHHHHHHHHHHHEECCCCCCHHHHHHCHHEEEEECHHHHHHC
NQPTNSQLVSKHSSQLYLWTERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIED
CCCCCHHHHHHCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHH
VLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLDSNSWRTNTHQLIARIAKKQG
HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
GFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHH
IEGYVAIVKDMALKYGISSDLSKN
HHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNNLQVIERNNERVLTTQQLADVYETDVNNIQANFNRNKDRFKENIHYFLLQGEYLKEFK
CCCCEEEECCCCEEEHHHHHHHHHHHHHHHEECCCCCCHHHHHHCHHEEEEECHHHHHHC
NQPTNSQLVSKHSSQLYLWTERGANRHCKILDTDKAWEQFDNLEETYFKVKQHKPTCIED
CCCCCHHHHHHCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHH
VLIESLKEMKDLRLQVNQANSIALEAKTEVETIKDVVSLDSNSWRTNTHQLIARIAKKQG
HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
GFEHINMLRTESYELLNKRFGVDLHRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKL
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHH
IEGYVAIVKDMALKYGISSDLSKN
HHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA