| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698418
Identifier: 126698418
GI number: 126698418
Start: 1014397
End: 1014708
Strand: Direct
Name: 126698418
Synonym: CD0838
Alternate gene names: NA
Gene position: 1014397-1014708 (Clockwise)
Preceding gene: 126698417
Following gene: 126698419
Centisome position: 23.64
GC content: 28.53
Gene sequence:
>312_bases ATGGGTATATTTAAAACAAAAATGGATGAGGACTGGAAAGTAAACTACATTAAAGAGTTTAATGAAATGAGAGATTCTTA TGAGAGTAAACTTCAAAAAAAACAGTTTGAGGTAGATAGTTTGAAATCAGAATTGGATAGACTAAGAAGCTATAAAAATA GCCTTAAGCCAAAAGAAAAACAAATTACTGATGATGATATAAATAATATAAAGAGTTTAAGAAGAGATGGCTTAAGCTAT AAAGAAATTTCAAATCAAACAAGTTGGAGCAAAGCAACTGTAAGTAGGGTATTAAATGGACTTTACGATTAG
Upstream 100 bases:
>100_bases TTATCTAGGGGTTATGTACAAGGATTTTAAAGATAAATATAGAAATTAATGTTTATAATCGATACATAACTTGAGTAACA AAATTTAAGGAGGTTAAAGT
Downstream 100 bases:
>100_bases CATATACATGGGGTGATTTAAATTGGGATGAAGTATAGTTACAAAAAATGCATAATAGATTCTATTTTATTGATGTTTAT AGTTCAAATATTAAGGATGA
Product: DNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MGIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEKQITDDDINNIKSLRRDGLSY KEISNQTSWSKATVSRVLNGLYD
Sequences:
>Translated_103_residues MGIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEKQITDDDINNIKSLRRDGLSY KEISNQTSWSKATVSRVLNGLYD >Mature_102_residues GIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEKQITDDDINNIKSLRRDGLSYK EISNQTSWSKATVSRVLNGLYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12279; Mature: 12148
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QITDDDINNIKSLRRDGLSYKEISNQTSWSKATVSRVLNGLYD CCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure GIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QITDDDINNIKSLRRDGLSYKEISNQTSWSKATVSRVLNGLYD CCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA