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The map label for this gene is rbr [H]

Identifier: 126698405

GI number: 126698405

Start: 1000307

End: 1000843

Strand: Direct

Name: rbr [H]

Synonym: CD0825

Alternate gene names: 126698405

Gene position: 1000307-1000843 (Clockwise)

Preceding gene: 126698404

Following gene: 126698406

Centisome position: 23.32

GC content: 31.28

Gene sequence:

>537_bases
ATGAACTTAAAAGGAACTAAAACAGAAAAGAATTTAATGGCAGGATTTGCAGGAGAGTCAGAAGCAAGAAATAAATATAC
ATACTACGCTTCAAAAGCAAGAAAAGAAGGTTATAATCAAATAGCTGCTATATTTGAAGAAACTGCTAACAATGAAAAGG
AACATGCTAAATTATGGTTTAAACTTTTACATGATGGTATGCCTTCAACAGAGGAAAATTTAAAGGATGCAGCAGCAGGT
GAAAATTATGAATGGACTGATATGTATGCAAAATTTGCTAAAGAAGCTAGAGAAGAAGGATTTGACAAGATAGCTTATTT
ATTTGAAGCTGTTGGAAAAATAGAGAAAGAGCATGAAGAAAGATACTTAAAGCTTTTAGAAAACTTAAATGAAGGAAAAA
TATTTAAAAGAGATGAAGAAGTTGTTTGGCAATGTCAAAACTGTGGTCATGTGTATGTAGGTACTGAAGCACCAGAAAAA
TGCCCAGTATGTGACCATCCAAAAGCATATTTTAATATAAAAGCTGAAAATTATTAA

Upstream 100 bases:

>100_bases
AAAATAATATTATATATAGTTGACAAAAATTGGCAAATGATATACTATATAAATATAGAAATAGTAATCATTACTATTAT
TAAAAAGGGAGGAATTAATT

Downstream 100 bases:

>100_bases
AAATTATCATTATTAAAAAGGAATGTTAACTATGAAATTTTCTAAACAACGAGAACTGATTTTAAATGAAATATTAAATA
ATCCGGTTCATCCTACTGCG

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNLKGTKTEKNLMAGFAGESEARNKYTYYASKARKEGYNQIAAIFEETANNEKEHAKLWFKLLHDGMPSTEENLKDAAAG
ENYEWTDMYAKFAKEAREEGFDKIAYLFEAVGKIEKEHEERYLKLLENLNEGKIFKRDEEVVWQCQNCGHVYVGTEAPEK
CPVCDHPKAYFNIKAENY

Sequences:

>Translated_178_residues
MNLKGTKTEKNLMAGFAGESEARNKYTYYASKARKEGYNQIAAIFEETANNEKEHAKLWFKLLHDGMPSTEENLKDAAAG
ENYEWTDMYAKFAKEAREEGFDKIAYLFEAVGKIEKEHEERYLKLLENLNEGKIFKRDEEVVWQCQNCGHVYVGTEAPEK
CPVCDHPKAYFNIKAENY
>Mature_178_residues
MNLKGTKTEKNLMAGFAGESEARNKYTYYASKARKEGYNQIAAIFEETANNEKEHAKLWFKLLHDGMPSTEENLKDAAAG
ENYEWTDMYAKFAKEAREEGFDKIAYLFEAVGKIEKEHEERYLKLLENLNEGKIFKRDEEVVWQCQNCGHVYVGTEAPEK
CPVCDHPKAYFNIKAENY

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 20614; Mature: 20614

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKGTKTEKNLMAGFAGESEARNKYTYYASKARKEGYNQIAAIFEETANNEKEHAKLWF
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KLLHDGMPSTEENLKDAAAGENYEWTDMYAKFAKEAREEGFDKIAYLFEAVGKIEKEHEE
HHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLKLLENLNEGKIFKRDEEVVWQCQNCGHVYVGTEAPEKCPVCDHPKAYFNIKAENY
HHHHHHHCCCCCCCEECCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MNLKGTKTEKNLMAGFAGESEARNKYTYYASKARKEGYNQIAAIFEETANNEKEHAKLWF
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KLLHDGMPSTEENLKDAAAGENYEWTDMYAKFAKEAREEGFDKIAYLFEAVGKIEKEHEE
HHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLKLLENLNEGKIFKRDEEVVWQCQNCGHVYVGTEAPEKCPVCDHPKAYFNIKAENY
HHHHHHHCCCCCCCEECCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11972784; 12949112 [H]