Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698403

Identifier: 126698403

GI number: 126698403

Start: 998377

End: 999138

Strand: Direct

Name: 126698403

Synonym: CD0823

Alternate gene names: NA

Gene position: 998377-999138 (Clockwise)

Preceding gene: 126698402

Following gene: 126698404

Centisome position: 23.27

GC content: 33.46

Gene sequence:

>762_bases
TTGCTTGATATAATTTCATGTGAATTTTCAAAACTCAAGCGGTTAAAATTTATACTGATTTCTATTTTAGGTGCTTGCTT
ATTTCCAATTCCCGCAACAATTTTGATTGCAAAGGATAACTTGCCCTTTGAGCAATTGTTCAAATTAGTTGTCAATTTTG
GATATTTTTTGCTATTACCAATTGTATTAAGTATTGTTGCTAGCCAACTATTTTTTATAGAAAGAGATAATGATGTATTA
AAAAATCTTGCAACAGTGCCAGTGCAAAAAGGAAAACTGGCTCTGGCAAAATTGGCTGTGTTGCTGTTTATATCATTGTT
CTACTCTGTTGCAGGGTTAGGAGCTACTATCATTGGAGGTTTCATTGTTGGAATAGTAGAGGGGGTTGCTGTAAAATTAG
GAATGAGCATTGCTTTTGGAATTATGTTTTTTGTTACTGTACTTCCTGTTGTGGTACTCATTGTATATTTCAATCGCAGC
TATATTTTTTCTATTATACTTTCTTTTGTATATGCTATTTTCAATTTTAGTATATCCTTAAATATTATCAATTTTGAACC
AAATAACCCAATATTAAGTGTATTACCTGCTCCTGTTATAATGCGTTGGTGGATGGCATTTTGGGGAGATCCCACTGGCG
AATACACGGCACTTAGACAGCCATATTTGCTCTCAACTCCTGCTTGTGTAGGTATTTTATGTTTGATAACCATTATAGCA
GTCCTGCTGATTTGTATGATATACAAAAAGCAGGAGAATTAG

Upstream 100 bases:

>100_bases
AATCGTGCTTTCATTCTAAACAACATTGAGGTATCAGAATCTCATTTATGCGAAGATACTCTTGAAGATTACTTCAAGAA
AGTAACAGGGGGTGAAGGAA

Downstream 100 bases:

>100_bases
GAGGTATCTATGCTTGATATAATTACTACAGAATTTCAAAAAATAAAAAGATATAATATTCTATGGATTGGTGTTGTTGC
TGTTCTGTTTTCAGCACTAT

Product: lantibiotic ABC transporter permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLPIVLSIVASQLFFIERDNDVL
KNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGGFIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRS
YIFSIILSFVYAIFNFSISLNIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA
VLLICMIYKKQEN

Sequences:

>Translated_253_residues
MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLPIVLSIVASQLFFIERDNDVL
KNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGGFIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRS
YIFSIILSFVYAIFNFSISLNIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA
VLLICMIYKKQEN
>Mature_253_residues
MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLPIVLSIVASQLFFIERDNDVL
KNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGGFIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRS
YIFSIILSFVYAIFNFSISLNIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA
VLLICMIYKKQEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28100; Mature: 28100

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLP
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
IVLSIVASQLFFIERDNDVLKNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGG
HHHHHHHHHHHHEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRSYIFSIILSFVYAIFNFSISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
NIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA
EEEEECCCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH
VLLICMIYKKQEN
HHHHHHHHHHCCC
>Mature Secondary Structure
MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLP
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
IVLSIVASQLFFIERDNDVLKNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGG
HHHHHHHHHHHHEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRSYIFSIILSFVYAIFNFSISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
NIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA
EEEEECCCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH
VLLICMIYKKQEN
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA