Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is spoVAE [H]

Identifier: 126698355

GI number: 126698355

Start: 945994

End: 946356

Strand: Direct

Name: spoVAE [H]

Synonym: CD0775

Alternate gene names: 126698355

Gene position: 945994-946356 (Clockwise)

Preceding gene: 126698354

Following gene: 126698356

Centisome position: 22.05

GC content: 32.78

Gene sequence:

>363_bases
ATGTTAATGGACTATGTAAGAGTATTTATTGTAGGTGGAATTATATGTTTAATAGCCCAAGTAATGATGGATTATTTCAA
AATGCAAACTCCATATGTTATGGTAACGTATGTAACAACTGGTGTAGTTTTAACTTTTCTAGGACTTTATGAGCCATTAG
TTAAGTTTGCAGCAGCAGGTGCAACAGTTCCTATAATAGGATTTGGATATTCACTTGCTACAGGAGTAATAAAATCAATT
CAAAGTGATGGTTTTTTAGGTATTTTTTTAGGAGGTACAACTGCTACAGCTGGTGGAATAGCAGCAGCTATATTCTTTGG
ATATATTATGTCAGTAGTATTTACTCCAAAAGCAAAACCATAA

Upstream 100 bases:

>100_bases
ACAGGAGCACTACTTTCACCGACAAGTACACTACAAAAGCAGACAATACCATGTGTTGCACATGCAGTAGTAATAGTAAA
TGAGTAGGAAGTGATATAAT

Downstream 100 bases:

>100_bases
ATCTTTATTAAAAGAATAATAAGTTTTTGAAATAATAACTTTTTATAAAGCAGGTGGATATCTTTTAGATTCCACCTGTT
TTTTATATAAAGAAGCGTTT

Product: stage V sporulation protein AE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAGATVPIIGFGYSLATGVIKSI
QSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP

Sequences:

>Translated_120_residues
MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAGATVPIIGFGYSLATGVIKSI
QSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP
>Mature_120_residues
MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAGATVPIIGFGYSLATGVIKSI
QSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014204
- InterPro:   IPR005562 [H]

Pfam domain/function: PF03862 SpoVA [H]

EC number: NA

Molecular weight: Translated: 12729; Mature: 12729

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ATVPIIGFGYSLATGVIKSIQSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP
CCCCCEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ATVPIIGFGYSLATGVIKSIQSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP
CCCCCEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]