| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is artP [H]
Identifier: 126698330
GI number: 126698330
Start: 917795
End: 918610
Strand: Direct
Name: artP [H]
Synonym: CD0750
Alternate gene names: 126698330
Gene position: 917795-918610 (Clockwise)
Preceding gene: 126698329
Following gene: 126698331
Centisome position: 21.39
GC content: 29.53
Gene sequence:
>816_bases ATGAAAGTATTTAAAAAATTATTAAGTTTAGGATTAGTATTAGGATTGACATTATCGCTAGTAGGATGTAGTGGTGGAGG AGAAAAAACAAAGTTAGAACAAATAAAAGACAATGGAAAATTAGTTGTTGGTACTAGTGCAGAATTTCCTCCATTTGAAT TTCATAAGGTAGTAGATGGAAAAGATTCAATAAAAGGATTCGATATAATGTTGGCTGAAGAATTTGCAAAAGAGCTTGGT GTAAAGGTTGAAATTAAGGATATGTCATTTGATGGATTAATAGGTGCTTTAAATGCAGACCAAGTTGATATTGTTCTTGC AGGTATGTCTCCAACACCAGAGAGAGAAAAGAGTGTTGATTTCTCAGAATTATATTATTTAAGTAGAAATGCAGTTATAG TTAAAGATGCAGATATAGACAAAGTAAAAACTGAAGATGATTTAAAGAAACTTAGAGTTGGAGTTCAAGCAGGAAGTATC CAAGAAGAATATGTAGTTAACACTTTAAAAATGACAACTACAAAATCTTTGAAAGCAATACCTGATTTAATTACAGAATT AAAAAATGGAAACATAGATGCAGTTGTTACTAATGAAGCAGTTTCTTTAATAAATGTTAAAAAATATGATGGAATAAAAA TGGCAAATACTGAAGTTGGGAAAGATGTAACAGAAGGTATGGCAGCAGCAATCAAAAAATCTGACAATAACAAAGATTTT ATAGAATTATTAAACAAAAAGATAAAAGAATTACAAGATGGCAAGAAGATAGAAGAATTTTTAAATGAAGCATCTACTGA AGCTGCTTCAAATTAG
Upstream 100 bases:
>100_bases TCTCTTAGTCATTAAAGACTGAGAGACTTTTTTTGTAACTCGAAACATTTAAGTATTAAAATCTGAGGGAAATTATAATT AAAAGAGAGGGGTAGTTAAA
Downstream 100 bases:
>100_bases TAAGAAAGTTATGTGGGAGATGAAATTATGAGTTTAGATTTTAGTTTTTTAAGTAGATTTGGGACTTCTTTTTTGGAAGG AACAGGTGTGACAGTATCAA
Product: amino acid ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKVFKKLLSLGLVLGLTLSLVGCSGGGEKTKLEQIKDNGKLVVGTSAEFPPFEFHKVVDGKDSIKGFDIMLAEEFAKELG VKVEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREKSVDFSELYYLSRNAVIVKDADIDKVKTEDDLKKLRVGVQAGSI QEEYVVNTLKMTTTKSLKAIPDLITELKNGNIDAVVTNEAVSLINVKKYDGIKMANTEVGKDVTEGMAAAIKKSDNNKDF IELLNKKIKELQDGKKIEEFLNEASTEAASN
Sequences:
>Translated_271_residues MKVFKKLLSLGLVLGLTLSLVGCSGGGEKTKLEQIKDNGKLVVGTSAEFPPFEFHKVVDGKDSIKGFDIMLAEEFAKELG VKVEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREKSVDFSELYYLSRNAVIVKDADIDKVKTEDDLKKLRVGVQAGSI QEEYVVNTLKMTTTKSLKAIPDLITELKNGNIDAVVTNEAVSLINVKKYDGIKMANTEVGKDVTEGMAAAIKKSDNNKDF IELLNKKIKELQDGKKIEEFLNEASTEAASN >Mature_271_residues MKVFKKLLSLGLVLGLTLSLVGCSGGGEKTKLEQIKDNGKLVVGTSAEFPPFEFHKVVDGKDSIKGFDIMLAEEFAKELG VKVEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREKSVDFSELYYLSRNAVIVKDADIDKVKTEDDLKKLRVGVQAGSI QEEYVVNTLKMTTTKSLKAIPDLITELKNGNIDAVVTNEAVSLINVKKYDGIKMANTEVGKDVTEGMAAAIKKSDNNKDF IELLNKKIKELQDGKKIEEFLNEASTEAASN
Specific function: Part of a binding-protein-dependent transport system for arginine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=246, Percent_Identity=29.6747967479675, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1787085, Length=213, Percent_Identity=31.924882629108, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787088, Length=263, Percent_Identity=30.7984790874525, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1787031, Length=206, Percent_Identity=35.9223300970874, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788649, Length=259, Percent_Identity=29.3436293436293, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29536; Mature: 29536
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFKKLLSLGLVLGLTLSLVGCSGGGEKTKLEQIKDNGKLVVGTSAEFPPFEFHKVVDG CHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCC KDSIKGFDIMLAEEFAKELGVKVEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREKSVD CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCHHHCCC FSELYYLSRNAVIVKDADIDKVKTEDDLKKLRVGVQAGSIQEEYVVNTLKMTTTKSLKAI HHHHHEEECCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH PDLITELKNGNIDAVVTNEAVSLINVKKYDGIKMANTEVGKDVTEGMAAAIKKSDNNKDF HHHHHHHCCCCEEEEEECCCEEEEEEECCCCEEECCCHHCHHHHHHHHHHHHCCCCCHHH IELLNKKIKELQDGKKIEEFLNEASTEAASN HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKVFKKLLSLGLVLGLTLSLVGCSGGGEKTKLEQIKDNGKLVVGTSAEFPPFEFHKVVDG CHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCC KDSIKGFDIMLAEEFAKELGVKVEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREKSVD CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCHHHCCC FSELYYLSRNAVIVKDADIDKVKTEDDLKKLRVGVQAGSIQEEYVVNTLKMTTTKSLKAI HHHHHEEECCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH PDLITELKNGNIDAVVTNEAVSLINVKKYDGIKMANTEVGKDVTEGMAAAIKKSDNNKDF HHHHHHHCCCCEEEEEECCCEEEEEEECCCCEEECCCHHCHHHHHHHHHHHHCCCCCHHH IELLNKKIKELQDGKKIEEFLNEASTEAASN HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]