Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is glnP [H]

Identifier: 126698331

GI number: 126698331

Start: 918638

End: 919315

Strand: Direct

Name: glnP [H]

Synonym: CD0751

Alternate gene names: 126698331

Gene position: 918638-919315 (Clockwise)

Preceding gene: 126698330

Following gene: 126698332

Centisome position: 21.41

GC content: 30.38

Gene sequence:

>678_bases
ATGAGTTTAGATTTTAGTTTTTTAAGTAGATTTGGGACTTCTTTTTTGGAAGGAACAGGTGTGACAGTATCAATTTCTCT
TGTGGCATTATGCTTTGGATTTATAATAGGTATAATTATCTGTATGGCAAAAATATCAAAGAGCAAAGTATTAAGAGCAA
TATCATCAATCTATATTGAGGTTTTAAGAGGGACACCATTATTAGTACAGATATATATAGTATGGTTTGGTTTACCTCAA
TTAGGAATAAGATTCCCTATGTTGTTTGGTATACCAAGTGAATTTATAGCTAGTGCATTTGCATTATCAGTAAACTCTGG
TGCATACGTGGCAGAGATACTTAGATCAGGTATACAATCAGTTGATAATGGACAAATGGAAGCAAGTAGATCATTAGGAT
TAAATTATTGGTCAACTATGAGATATATAATAATACCTCAAGCTATAAAAAATATATTACCTTCATTAGCAAATGAGTTT
ATTACACTTGTAAAAGAATCTTCAATAATATCTGTAATAGGAGTTGTTGAGATAATGCGTACTGCTGATATAGTAAAAAA
TGCAGCATTTAGAGCATTAGAGCCATTAATAGTAGCAGCAGCAATTTACTTTGTTATAACATTTACTCTATCAAGATTAG
TTGGATTATTAGAAAAGAAACTATCTGTGTCTAACTAG

Upstream 100 bases:

>100_bases
AAAAGAATTACAAGATGGCAAGAAGATAGAAGAATTTTTAAATGAAGCATCTACTGAAGCTGCTTCAAATTAGTAAGAAA
GTTATGTGGGAGATGAAATT

Downstream 100 bases:

>100_bases
ATGAGAGCATGTTTAGCATTTAGGGAAAACATAGAATAGTAAAAAGGAAAGTGATAATATGATTACAATAAAAAATTTAA
GTAAATCTTTTGGAGATTTA

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSLDFSFLSRFGTSFLEGTGVTVSISLVALCFGFIIGIIICMAKISKSKVLRAISSIYIEVLRGTPLLVQIYIVWFGLPQ
LGIRFPMLFGIPSEFIASAFALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANEF
ITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEKKLSVSN

Sequences:

>Translated_225_residues
MSLDFSFLSRFGTSFLEGTGVTVSISLVALCFGFIIGIIICMAKISKSKVLRAISSIYIEVLRGTPLLVQIYIVWFGLPQ
LGIRFPMLFGIPSEFIASAFALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANEF
ITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEKKLSVSN
>Mature_224_residues
SLDFSFLSRFGTSFLEGTGVTVSISLVALCFGFIIGIIICMAKISKSKVLRAISSIYIEVLRGTPLLVQIYIVWFGLPQL
GIRFPMLFGIPSEFIASAFALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANEFI
TLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEKKLSVSN

Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=38.1642512077295, Blast_Score=154, Evalue=4e-39,
Organism=Escherichia coli, GI1787030, Length=223, Percent_Identity=35.4260089686099, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1786873, Length=208, Percent_Identity=29.8076923076923, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI87082239, Length=225, Percent_Identity=30.6666666666667, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI48994930, Length=187, Percent_Identity=35.2941176470588, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1786874, Length=239, Percent_Identity=28.0334728033473, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=26.0869565217391, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=27.8301886792453, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787087, Length=210, Percent_Identity=29.0476190476191, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788646, Length=230, Percent_Identity=24.7826086956522, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24557; Mature: 24425

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDFSFLSRFGTSFLEGTGVTVSISLVALCFGFIIGIIICMAKISKSKVLRAISSIYIE
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRGTPLLVQIYIVWFGLPQLGIRFPMLFGIPSEFIASAFALSVNSGAYVAEILRSGIQS
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANEFITLVKESSIISVIGVVEIMR
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEKKLSVSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLDFSFLSRFGTSFLEGTGVTVSISLVALCFGFIIGIIICMAKISKSKVLRAISSIYIE
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRGTPLLVQIYIVWFGLPQLGIRFPMLFGIPSEFIASAFALSVNSGAYVAEILRSGIQS
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANEFITLVKESSIISVIGVVEIMR
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEKKLSVSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA