| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698129
Identifier: 126698129
GI number: 126698129
Start: 655805
End: 656461
Strand: Direct
Name: 126698129
Synonym: CD0550
Alternate gene names: NA
Gene position: 655805-656461 (Clockwise)
Preceding gene: 126698128
Following gene: 126698131
Centisome position: 15.29
GC content: 33.49
Gene sequence:
>657_bases ATGAAAAAAGGCGATTTTATATGGAGTGGAGTTCTTATTTGTATTATTGCTGTCTTAGCAATACCAAGTAGTAGAGAAGT ATTTATGGAAGCAACAGGTGCACATCCATATATTGGAGGTTTTTTAAAGTTTGCTGTATTAGCTACAATGGGAGATTTAC TTGGTGCTAGAATTTTGTATAAGGATTGGAAAATACCAGTAGGAGTATTTTATAGAGCAATAGTTTGGGGAATAATAGGT GTAGTTACCACATATGGAATGTCAATCTACTCATCAGGTGTAGGTCAAGCACAAGTGGATGGTATGCTTCCATTTGAGGG AATAGCTTTTGCAAATGCTCTATTTAAGAGTGCAACTATGAATATACTAATGTCACCAACTGTATTTTTATTCCATAAGG TTATGGACTGTTTTATAGATAAAAAATATGAGGTTGGAAAGGGGATTAAGGTAAAACTTAAAGATGTGGTAAATATTGTG GACTGGAATGCTTACCTTGGTTTTAGTGTTTTAAAAACTATACCATTTTTCTGGATACCATGTCATACAATTGTATTTTT ATTCCCTGCTGAGTATAGAGTAATTGCTTCTGCATTTGCATCTATAGCTTTAGGTCTAATATTGGCTTTAGCTAATAAGT CTAAAGTTGCAGTTTAG
Upstream 100 bases:
>100_bases TAATAATAAGTGATTAATAAATAATTGTAGATAGATTGTAAATTAAATAAATCTTTAATAGAAAGGAGAACTATTTATAT ATTAAATAGTATTTATAAAT
Downstream 100 bases:
>100_bases ATTCACTGATGAAGATAGTAGTATTATTTAAATTAGGAATAACTTTTTAAATTAATATTATTTGTATTTATAATAAATAA TAATTTATATAAGAAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKKGDFIWSGVLICIIAVLAIPSSREVFMEATGAHPYIGGFLKFAVLATMGDLLGARILYKDWKIPVGVFYRAIVWGIIG VVTTYGMSIYSSGVGQAQVDGMLPFEGIAFANALFKSATMNILMSPTVFLFHKVMDCFIDKKYEVGKGIKVKLKDVVNIV DWNAYLGFSVLKTIPFFWIPCHTIVFLFPAEYRVIASAFASIALGLILALANKSKVAV
Sequences:
>Translated_218_residues MKKGDFIWSGVLICIIAVLAIPSSREVFMEATGAHPYIGGFLKFAVLATMGDLLGARILYKDWKIPVGVFYRAIVWGIIG VVTTYGMSIYSSGVGQAQVDGMLPFEGIAFANALFKSATMNILMSPTVFLFHKVMDCFIDKKYEVGKGIKVKLKDVVNIV DWNAYLGFSVLKTIPFFWIPCHTIVFLFPAEYRVIASAFASIALGLILALANKSKVAV >Mature_218_residues MKKGDFIWSGVLICIIAVLAIPSSREVFMEATGAHPYIGGFLKFAVLATMGDLLGARILYKDWKIPVGVFYRAIVWGIIG VVTTYGMSIYSSGVGQAQVDGMLPFEGIAFANALFKSATMNILMSPTVFLFHKVMDCFIDKKYEVGKGIKVKLKDVVNIV DWNAYLGFSVLKTIPFFWIPCHTIVFLFPAEYRVIASAFASIALGLILALANKSKVAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23907; Mature: 23907
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGDFIWSGVLICIIAVLAIPSSREVFMEATGAHPYIGGFLKFAVLATMGDLLGARILY CCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH KDWKIPVGVFYRAIVWGIIGVVTTYGMSIYSSGVGQAQVDGMLPFEGIAFANALFKSATM HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHH NILMSPTVFLFHKVMDCFIDKKYEVGKGIKVKLKDVVNIVDWNAYLGFSVLKTIPFFWIP HHHHCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH CHTIVFLFPAEYRVIASAFASIALGLILALANKSKVAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKGDFIWSGVLICIIAVLAIPSSREVFMEATGAHPYIGGFLKFAVLATMGDLLGARILY CCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH KDWKIPVGVFYRAIVWGIIGVVTTYGMSIYSSGVGQAQVDGMLPFEGIAFANALFKSATM HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHH NILMSPTVFLFHKVMDCFIDKKYEVGKGIKVKLKDVVNIVDWNAYLGFSVLKTIPFFWIP HHHHCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH CHTIVFLFPAEYRVIASAFASIALGLILALANKSKVAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA