Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698128

Identifier: 126698128

GI number: 126698128

Start: 654123

End: 654533

Strand: Direct

Name: 126698128

Synonym: CD0549

Alternate gene names: NA

Gene position: 654123-654533 (Clockwise)

Preceding gene: 126698127

Following gene: 126698129

Centisome position: 15.25

GC content: 30.41

Gene sequence:

>411_bases
ATGAAAATAAAAAAATCCCTTATAAGTGCAATGATGGTATCTGCAATGGTACTAGGAGGAACTGGAGCAGTATTTGCAAA
TGGAAATGATTCATCTAATATTGCTTTACCTAAATTTGAATCTCTAATAAAATCAGGAATAACTGACCCTACTGAATTAG
AAAAGTATGGTGTTGAGCATTATACTTATGAAGAGTATGCTAAACATATTCAAGAATTAAAAGACTATGCTAAAGACCCT
AATGCAGTCAAAGATGTAAGTCAAAAAGACCTTGAGGAAACAATTAAGAAAATGGAACAAGAATTAGAAAAGATAAAAAC
TGAAGGATTAAAAATTATGAAGCCTATCACTATAGAAAATGAAGATGGGTCTCAAATTTCAATTGCTTACAATTATGCAG
CAATTGACTAA

Upstream 100 bases:

>100_bases
CATGACTACTATGATAGTCTAAGGATGTGGTTGATAACTATTGCAATAGTCATTTTAAACTACACTACCCAAATAAATCT
CTAAGAAAGGAAGATTGGTT

Downstream 100 bases:

>100_bases
TGTTAAATATAATCTCTAAGATATTTCAAAATCCTAAGTAAGTATGATTAAATACATTAAGCTACTGTAATGATATAAAC
ATGCAGTTGATGATTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKIKKSLISAMMVSAMVLGGTGAVFANGNDSSNIALPKFESLIKSGITDPTELEKYGVEHYTYEEYAKHIQELKDYAKDP
NAVKDVSQKDLEETIKKMEQELEKIKTEGLKIMKPITIENEDGSQISIAYNYAAID

Sequences:

>Translated_136_residues
MKIKKSLISAMMVSAMVLGGTGAVFANGNDSSNIALPKFESLIKSGITDPTELEKYGVEHYTYEEYAKHIQELKDYAKDP
NAVKDVSQKDLEETIKKMEQELEKIKTEGLKIMKPITIENEDGSQISIAYNYAAID
>Mature_136_residues
MKIKKSLISAMMVSAMVLGGTGAVFANGNDSSNIALPKFESLIKSGITDPTELEKYGVEHYTYEEYAKHIQELKDYAKDP
NAVKDVSQKDLEETIKKMEQELEKIKTEGLKIMKPITIENEDGSQISIAYNYAAID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15152; Mature: 15152

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKSLISAMMVSAMVLGGTGAVFANGNDSSNIALPKFESLIKSGITDPTELEKYGVEH
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECHHHHHHHHCCCCCHHHHHHHCCCC
YTYEEYAKHIQELKDYAKDPNAVKDVSQKDLEETIKKMEQELEKIKTEGLKIMKPITIEN
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEC
EDGSQISIAYNYAAID
CCCCEEEEEEECEECC
>Mature Secondary Structure
MKIKKSLISAMMVSAMVLGGTGAVFANGNDSSNIALPKFESLIKSGITDPTELEKYGVEH
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECHHHHHHHHCCCCCHHHHHHHCCCC
YTYEEYAKHIQELKDYAKDPNAVKDVSQKDLEETIKKMEQELEKIKTEGLKIMKPITIEN
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEC
EDGSQISIAYNYAAID
CCCCEEEEEEECEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA