Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698100

Identifier: 126698100

GI number: 126698100

Start: 619229

End: 620407

Strand: Direct

Name: 126698100

Synonym: CD0519

Alternate gene names: NA

Gene position: 619229-620407 (Clockwise)

Preceding gene: 126698099

Following gene: 126698101

Centisome position: 14.43

GC content: 35.2

Gene sequence:

>1179_bases
ATGGAAAAGCTGTCGGATAAGAGAAGAGTCAAGGCAGTAAGTATGGAAACCTTCGTATTTATTGTACTATTGGCGGTAGG
ATTTGGATATGTAGGAAGCATCATGGGTGCAGGAATGATGTTTAAAGTAATAATGAGTACAGCACATGCGCTTTTATTAG
ACACAGTATTTTTAATAATGGCTATGGCAGTTCTTGCAGGTGCACTTAGTGCATTGCTTTCAGAGTTTGGAGTAATATCT
TTAGTTAATAAGATATTTAAGGGTCTTATGAGACCTATATGGGGCTTACCTGGTGCTAGTATAGCAGGAGTAGTTGCAAC
ATATTTATCTGATAATCCAGCTATTATACCATTTGCTAAAGACAAAACATTTACACAATATTTTAAGAAGTATCAAGTAC
CTGCTTTATGTAATTTAGGAACAGCCTTTGGTATGGGACTTATTGTAACAACTTTTATGATAGCTCAAGGTAAAGAATAT
GTACTACCAGCTATAATAGGTAATGTTGCGGCAATAATAGGTAGTATTATTAGTGTTAGAATTATGTTGACTTTTACTAA
AAAGTATTATAATTATGACCCTAAAAATGATACTGAAAAGCAAATAAATGATAAAGGTGCAAAACTTGAAGAGTTTAGAG
AAATAAGAGATGGTAATGTATTCCAAAGAACATTGGATGCTATACTTGAAGGTGGTAAGTTAGGTGTTGAAATGGGTATG
GCTATAATACCAGGAGTTTTAGTAGTTTGTACATTAGTTATGTTATTAACTTTTGGACCATCTACAGACCCTGCTACAGG
TCAAGCTGTTTACACAGGAGCTGCATATGAAGGTATAAAATTATTACCTGCTATTGGTGATAAGATTAGCTTCATAATAG
AACCATTATTTGGATTCACATCACCAGAGGCAATAGCATTCCCTGTAACTGCATTAGGAGCTGTTGGAGCAGCAATATCT
TTAGTACCAGAGTTTATAAAATCAGGCGCTATAACTCCTAATGATATAGCAGTATTCACAGCAATGGGTATGTGTTGGAG
TGGATATTTAAGTACACACATAGGTATGATGGATGCTTTAGATGCAAGACCATTGGCTGGTAAAGCGATACTTTCGCATA
CTATAGGTGGTTTATGTGCAGGTATATGTGCCCACTTTATATTTATGCTTGTTGGATAG

Upstream 100 bases:

>100_bases
CTTGCATTACGAGTGTAAGTTTTAGAACTCAGTTTGTACCAAAAAATTTGTACCAATGTTAGGAACCTTAATTTAAAATT
AAAAGGGGGAAGATTTCAAG

Downstream 100 bases:

>100_bases
AAATGTTTTATAATTGAAGTATTATAATTTATGAAATTGAATAAAACTATTGATTTAAGTATGTAAAAACTAAATTAGTA
ATTTAAATATATAGGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MEKLSDKRRVKAVSMETFVFIVLLAVGFGYVGSIMGAGMMFKVIMSTAHALLLDTVFLIMAMAVLAGALSALLSEFGVIS
LVNKIFKGLMRPIWGLPGASIAGVVATYLSDNPAIIPFAKDKTFTQYFKKYQVPALCNLGTAFGMGLIVTTFMIAQGKEY
VLPAIIGNVAAIIGSIISVRIMLTFTKKYYNYDPKNDTEKQINDKGAKLEEFREIRDGNVFQRTLDAILEGGKLGVEMGM
AIIPGVLVVCTLVMLLTFGPSTDPATGQAVYTGAAYEGIKLLPAIGDKISFIIEPLFGFTSPEAIAFPVTALGAVGAAIS
LVPEFIKSGAITPNDIAVFTAMGMCWSGYLSTHIGMMDALDARPLAGKAILSHTIGGLCAGICAHFIFMLVG

Sequences:

>Translated_392_residues
MEKLSDKRRVKAVSMETFVFIVLLAVGFGYVGSIMGAGMMFKVIMSTAHALLLDTVFLIMAMAVLAGALSALLSEFGVIS
LVNKIFKGLMRPIWGLPGASIAGVVATYLSDNPAIIPFAKDKTFTQYFKKYQVPALCNLGTAFGMGLIVTTFMIAQGKEY
VLPAIIGNVAAIIGSIISVRIMLTFTKKYYNYDPKNDTEKQINDKGAKLEEFREIRDGNVFQRTLDAILEGGKLGVEMGM
AIIPGVLVVCTLVMLLTFGPSTDPATGQAVYTGAAYEGIKLLPAIGDKISFIIEPLFGFTSPEAIAFPVTALGAVGAAIS
LVPEFIKSGAITPNDIAVFTAMGMCWSGYLSTHIGMMDALDARPLAGKAILSHTIGGLCAGICAHFIFMLVG
>Mature_392_residues
MEKLSDKRRVKAVSMETFVFIVLLAVGFGYVGSIMGAGMMFKVIMSTAHALLLDTVFLIMAMAVLAGALSALLSEFGVIS
LVNKIFKGLMRPIWGLPGASIAGVVATYLSDNPAIIPFAKDKTFTQYFKKYQVPALCNLGTAFGMGLIVTTFMIAQGKEY
VLPAIIGNVAAIIGSIISVRIMLTFTKKYYNYDPKNDTEKQINDKGAKLEEFREIRDGNVFQRTLDAILEGGKLGVEMGM
AIIPGVLVVCTLVMLLTFGPSTDPATGQAVYTGAAYEGIKLLPAIGDKISFIIEPLFGFTSPEAIAFPVTALGAVGAAIS
LVPEFIKSGAITPNDIAVFTAMGMCWSGYLSTHIGMMDALDARPLAGKAILSHTIGGLCAGICAHFIFMLVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41689; Mature: 41689

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA