Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698099

Identifier: 126698099

GI number: 126698099

Start: 618509

End: 619003

Strand: Direct

Name: 126698099

Synonym: CD0518

Alternate gene names: NA

Gene position: 618509-619003 (Clockwise)

Preceding gene: 126698098

Following gene: 126698100

Centisome position: 14.42

GC content: 27.07

Gene sequence:

>495_bases
GTGCATTTGTTTATAGAAGTAATAGCAGCTTTTTTTACTGCCTTAAGCTTTGGAGTGCTATTTAATATGAAAGGAAAAAA
CTTAATACTAGCAGGAATAGGTGGAAGTATAGCTTGGTTTTCATATAAATTTCTTTTAAATATAGGAGTAACAGAAAACT
TATGTTTTTTTATAGCTACAGTTTGTTTTGCGATATATTGTGAGTTATGTGCAAGAATTTATATGACTCCAGCAACTACA
TTAAGTGTTTGCTGTTTAATAATATTAGTACCAGGTTATGGAATATATAATACTATGTATTCTGTTTTGACCAATAATTA
TATAAAAGCTGTAGAATATGGGGTGAGTACATTATCGTGTGCAAGTTCAATTGCATTAGGATTGGTATTTATAACTACTG
TATTTAGAAAAGTCAACTTATATGGAGTACTTACAAAGATAAAAGAAAATGAAAAATATAAAAAGAGTATAAATAAAATT
AAACAACAAAAATAG

Upstream 100 bases:

>100_bases
TGGTCTTGCAAAATTAGCAGAAGTATTTTTTGTAGGTGTATCTATAGCAGTAGGAATGTTCTTGGTACTTGGATTGTACT
TCAAGTTAGGGGGGATATAA

Downstream 100 bases:

>100_bases
AAAAAATTGACTTTTAAACAAAAGGATGATAATATAATAACATAAAATAGAATAAGAGTATCCAAATTAAAGAGGATATT
CTTATTCTATAAACGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Threonine/Serine Exporter

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MHLFIEVIAAFFTALSFGVLFNMKGKNLILAGIGGSIAWFSYKFLLNIGVTENLCFFIATVCFAIYCELCARIYMTPATT
LSVCCLIILVPGYGIYNTMYSVLTNNYIKAVEYGVSTLSCASSIALGLVFITTVFRKVNLYGVLTKIKENEKYKKSINKI
KQQK

Sequences:

>Translated_164_residues
MHLFIEVIAAFFTALSFGVLFNMKGKNLILAGIGGSIAWFSYKFLLNIGVTENLCFFIATVCFAIYCELCARIYMTPATT
LSVCCLIILVPGYGIYNTMYSVLTNNYIKAVEYGVSTLSCASSIALGLVFITTVFRKVNLYGVLTKIKENEKYKKSINKI
KQQK
>Mature_164_residues
MHLFIEVIAAFFTALSFGVLFNMKGKNLILAGIGGSIAWFSYKFLLNIGVTENLCFFIATVCFAIYCELCARIYMTPATT
LSVCCLIILVPGYGIYNTMYSVLTNNYIKAVEYGVSTLSCASSIALGLVFITTVFRKVNLYGVLTKIKENEKYKKSINKI
KQQK

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18258; Mature: 18258

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLFIEVIAAFFTALSFGVLFNMKGKNLILAGIGGSIAWFSYKFLLNIGVTENLCFFIAT
CHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHH
VCFAIYCELCARIYMTPATTLSVCCLIILVPGYGIYNTMYSVLTNNYIKAVEYGVSTLSC
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSIALGLVFITTVFRKVNLYGVLTKIKENEKYKKSINKIKQQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MHLFIEVIAAFFTALSFGVLFNMKGKNLILAGIGGSIAWFSYKFLLNIGVTENLCFFIAT
CHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHH
VCFAIYCELCARIYMTPATTLSVCCLIILVPGYGIYNTMYSVLTNNYIKAVEYGVSTLSC
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSIALGLVFITTVFRKVNLYGVLTKIKENEKYKKSINKIKQQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA