| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is bglF [H]
Identifier: 126697957
GI number: 126697957
Start: 457410
End: 459272
Strand: Direct
Name: bglF [H]
Synonym: CD0388
Alternate gene names: 126697957
Gene position: 457410-459272 (Clockwise)
Preceding gene: 126697924
Following gene: 126697958
Centisome position: 10.66
GC content: 31.29
Gene sequence:
>1863_bases ATGAATTATAAAAAAACTGCCATTGACATTATTGAACAAGTTGGTGGTTCAAAAAATATTTTAGCTTTAGAACACTGTTC AACTAGACTACGCTTTAAGTTGATTGATAGAAGTAAAGTCAATCAAGATGCTTTAAAAAAAGTACAAGGTGTTATGAGTA TAGTTAATGGGGCACAATTTCAAGTTGTCATTGGAAATAGTGTTGTTGATGTGTATGATGAAATTTTAAAAGTTTGCCCT TTAGATACAAATGATAGTACTGTAAAAACTGAAGAAAAAATAAACTTAGGAACAAGATTTATAGAATTTATTATTAATAT TTTTCAACCACTGATTTTTGCTATTGCAGGAGCTGGTATTTTAAAATCACTGTTGATGTTATTAGCAATGTTTAATATTT TAAAATCAGATTCTACTATATATACATTATTAGTTGCTATTTCAGATGCAACATTCTATTTCCTACCTCTTATGGTAGCT GTAACTACTGCCAATGTATTGAAATGTAATCGTTTAGTAGCTATTGCCGCTGTAGGATACTTATTGCTTCCAGCAACAAC AACTGCTTTAAGTGAAGGTGTCGAACTATTTGGATTTACAATTCCAAACATTGCCTATAATGCACAGGTTTTCCCGGCTA TCTTATGTGTGTCTTTCTTGGCAACAATGGAGAAAATTTTTAACAAGTATTCACCAAAACCAATTCGAACTTTCTTTGTT CCTATGATGTCTTTGGCAATTACTGTTCCAATTACTCTAACTATTTTAGGTCCTTTAGGATATAACGTTGGTACAATTTT TACAACCATTATTTTATTCTTATATAACAAAATGGGATTCTTAGTTGTAGGATTACTTGCTGGTTTTCTTCCATTTATGG TTGCAACAGGAATGCACAAAGCACTAATACCTTATTCAATTAATACAATTGGAAAGTTGGGTTATGAAGCTTTATATATG ACATCTTCATTAGCCCACAATATTTCTGAAAGTGGTGCTTGTTTTGCAGTAGCCTTGCGAACAAAAGATGAAACATTAAA ACAAACAGCATTATCTGCAGGAATTTCTGCCTTGATGGGAATTACAGAGCCAGCTTTATATGGTATTACTTTACAACATA AAAGAGCAATGTTAGGTGTTGTATTCTCAAGTGCAATTTCTGGTACCTTTTTAGGATTATTTGCAGTAAAAGGATTTGTA ATTGTTGGACCAGGGCTTGCCAGTATGAGTATGTTTATTGACCCAAACAATGGAAACAATTTGATTTTTGCAAGTATTGG TTTTGTTATTGCAATATTAGGCTCGTTTATTATTACACTGATTATTTGGAAGGAAGATACAAATACAGTAGAGTCATCAA TTGGAGATGTTGTTGAAGAAGAGCTAGAAGAAGAAAAAGAAGTAAATATCTTAGTAACTCCAGTAGAAGGAAAAGTAATA GATTTAAGTAAGGTTAATGATGAACTATTTGCAAGTAAGACTTTGGGAGATGGAGTTGCAATTATACCGACCAATGGAAA TTTATACGCACCTTGTGATTCAGAAGTTGTGATGTTATTTGAAACAAAACATGCAATTGGTTTAAGAACAAAAAATGGGG CTGAGATTTTGATTCATATTGGAATAAATACTGTAAGTATGAATGGAGATGGATTTAAAACATTTGTTAAGACAAGCGAT AATGTAAAAGAAGGAGATTTATTAATTCAATTTGATTTAGACAAAATCTCACATGCTAATTTAGATTCAACTGTTATGAT TGTAAACAATAATGGAGCAGATTATGCTTATAAAGTGTTAAACCAGTCTTATGGCAATGTAAAAAAAGGAAGTATCTTGT TTGATGTAAAGGGAGGAATATAA
Upstream 100 bases:
>100_bases GAATATATTGCTTTGATTTTTCAAGGTGTTTATATAGGTTCTGCCTTTTTTGCATCTTGAATGGCCATTCATAAAAAATT ATGGAGAAGGAGATTACAAG
Downstream 100 bases:
>100_bases ATATGAGAAAGTTTCCAGAAGGATTTCTTTGGGGAGGAGCTACAGCTGCTAATCAATTTGAAGGTGGTTGGAATTTAGGT GGTAAAGGGTGGTCTGTATC
Product: PTS system beta-glucoside-specific transporter subunit IIABC
Products: NA
Alternate protein names: EIIBCA-Bgl; EII-Bgl; Beta-glucoside-specific phosphotransferase enzyme IIB component; PTS system beta-glucoside-specific EIIB component; Beta-glucoside permease IIC component; PTS system beta-glucoside-specific EIIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component; PTS system beta-glucoside-specific EIIA component [H]
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQFQVVIGNSVVDVYDEILKVCP LDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVA VTTANVLKCNRLVAIAAVGYLLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHKALIPYSINTIGKLGYEALYM TSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFV IVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTSD NVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVKGGI
Sequences:
>Translated_620_residues MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQFQVVIGNSVVDVYDEILKVCP LDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVA VTTANVLKCNRLVAIAAVGYLLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHKALIPYSINTIGKLGYEALYM TSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFV IVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTSD NVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVKGGI >Mature_620_residues MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQFQVVIGNSVVDVYDEILKVCP LDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVA VTTANVLKCNRLVAIAAVGYLLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHKALIPYSINTIGKLGYEALYM TSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFV IVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTSD NVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVKGGI
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790159, Length=628, Percent_Identity=33.9171974522293, Blast_Score=325, Evalue=5e-90, Organism=Escherichia coli, GI48994906, Length=462, Percent_Identity=32.2510822510823, Blast_Score=251, Evalue=1e-67, Organism=Escherichia coli, GI2367362, Length=413, Percent_Identity=28.3292978208232, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI1786894, Length=148, Percent_Identity=37.8378378378378, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788769, Length=411, Percent_Identity=26.0340632603406, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788757, Length=103, Percent_Identity=39.8058252427184, Blast_Score=96, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011297 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 67064; Mature: 67064
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQF CCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEE QVVIGNSVVDVYDEILKVCPLDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGI EEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVAVTTANVLKCNRLVAIAAVGY HHHHHHHHHHHHHHCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV HHHCCHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHK HHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ALIPYSINTIGKLGYEALYMTSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMG EECCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH ITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFVIVGPGLASMSMFIDPNNGNN CCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHEEEEEEECCCCCE LIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI EEEEHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEE DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHI EHHHCCHHHHHHHCCCCCEEEEECCCCEECCCCCCEEEEEECCCCEEEEECCCCEEEEEE GINTVSMNGDGFKTFVKTSDNVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVL CCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHH NQSYGNVKKGSILFDVKGGI HCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQF CCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEE QVVIGNSVVDVYDEILKVCPLDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGI EEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVAVTTANVLKCNRLVAIAAVGY HHHHHHHHHHHHHHCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVSFLATMEKIFNKYSPKPIRTFFV HHHCCHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH PMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGFLVVGLLAGFLPFMVATGMHK HHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ALIPYSINTIGKLGYEALYMTSSLAHNISESGACFAVALRTKDETLKQTALSAGISALMG EECCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH ITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFVIVGPGLASMSMFIDPNNGNN CCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHEEEEEEECCCCCE LIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVI EEEEHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEE DLSKVNDELFASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHI EHHHCCHHHHHHHCCCCCEEEEECCCCEECCCCCCEEEEEECCCCEEEEECCCCEEEEEE GINTVSMNGDGFKTFVKTSDNVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVL CCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHH NQSYGNVKKGSILFDVKGGI HCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7883710; 7704263; 9384377; 8628237 [H]