| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is fliG [H]
Identifier: 126697820
GI number: 126697820
Start: 311916
End: 312986
Strand: Direct
Name: fliG [H]
Synonym: CD0249
Alternate gene names: 126697820
Gene position: 311916-312986 (Clockwise)
Preceding gene: 126697819
Following gene: 126697821
Centisome position: 7.27
GC content: 30.53
Gene sequence:
>1071_bases GTGTCCACAGAAATTACAAATGTTAATGCGTTTGACTTAAGTGATATAAGTGAAAGTGATAAGAACGAGAAAATAGAAGG TGAAGGTTTAAAAAAAGCTGCTGTATTATTAATGACATTAGGGCCAGATGTCTCTAGCGATATAATAAAAAGTTTGCCTG ATAAACAAGTTCAAAAAATAGGTTTGGAAATTGCAAATATTTCTTCAATAGCTTCTAAAGAAAGAAGAGAAATCTTAAAA GAGTTTGTAGAAATAAATAGAGCAAAAGATTATGTTATAGAAGGTGGGCTTGAATATGCAAGAGAGTTATTAAGTAATGC TTTGGGAAATGCTAAAGCAAACAAATTACTTGAAGGTATATCAATAAATACAAGTACAAAGCCTTTTAAACATATTATCA AACTAGATGTAAAGAAGATATTAGAAATACTTAGGAATGAAAGTGCACAAACTATAGCCGTTTTACTTGCACATATGGAA CCAGAAAATGGGGCAGAAGTTTTATCATATTTAGACTTTGATTTACAAAATGAAGTAGCTATTAGAATAAGTTCAATGGG TTCAATATCTCCAGAAGTAATAAAGGTAATTGAAAGTTCATTAGAAGATAAATTACATTCAATAAGTGGTGATGATTTTA AGGATTATGGAGGAGTGTCTACCTTAGTTCAAATATTGATTAATTCTGATAGAAAAACAGAAAAGAATATCTTGGGAACT ATTGAAGAACAAAACCCGGATTTAGCAGCTCAAATTAAATCTCATATATTTGTCTTTGAAGATATTGTCAAGTTAGATGA TATAAGCATACAAAAAGTGTTAAAAGAAGTAACTATGAAAGATTTAGTATATGCCTTAAAAGGTGTGGATGATGCGATTT CAGATGCTATATATAGAAATCAATCTTCTAGGGCAGCAGAGGCACTTAGAGAAGAAATGGAAATGGTTGGTGTTATAAAG GTTACACAGGTTGAGGCTGCTCAACAAAAAATAGTAAATAGTGTAAGAAAACTTGAAAGAGAAGGTGCCATAACTATTGT AAGGAATTTTGGTGATGACTTTGTTGAATAA
Upstream 100 bases:
>100_bases ACTGACATTAGAGGAAGCTGTTAAAATGTATGCAGAAGAAAAGCCAGACCAAGTGACAGAGATAATAAAAACTTGGTTAA ATGAGTAAGGGGGATAGAAA
Downstream 100 bases:
>100_bases TAAGATTATTAAAAGTAAAAAAGCATCATATAAAGGAGTTTTAGATTTATCCATAATAGATAAAGTTAGAGTGGGAGAAT CAAATCTAAATAAAGAAAAT
Product: flagellar motor switch protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSTEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKIGLEIANISSIASKERREILK EFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGISINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHME PENGAEVLSYLDFDLQNEVAIRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGT IEEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRNQSSRAAEALREEMEMVGVIK VTQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE
Sequences:
>Translated_356_residues MSTEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKIGLEIANISSIASKERREILK EFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGISINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHME PENGAEVLSYLDFDLQNEVAIRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGT IEEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRNQSSRAAEALREEMEMVGVIK VTQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE >Mature_355_residues STEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKIGLEIANISSIASKERREILKE FVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGISINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHMEP ENGAEVLSYLDFDLQNEVAIRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGTI EEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRNQSSRAAEALREEMEMVGVIKV TQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=321, Percent_Identity=29.9065420560748, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 39430; Mature: 39298
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHH GLEIANISSIASKERREILKEFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCC SINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHMEPENGAEVLSYLDFDLQNEVA CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCE IRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGT EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHCC IEEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRN CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC QSSRAAEALREEMEMVGVIKVTQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCC >Mature Secondary Structure STEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKI CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHH GLEIANISSIASKERREILKEFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCC SINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHMEPENGAEVLSYLDFDLQNEVA CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCE IRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGT EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHCC IEEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRN CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC QSSRAAEALREEMEMVGVIKVTQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571; 10440379 [H]