Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is fliG [H]

Identifier: 126697820

GI number: 126697820

Start: 311916

End: 312986

Strand: Direct

Name: fliG [H]

Synonym: CD0249

Alternate gene names: 126697820

Gene position: 311916-312986 (Clockwise)

Preceding gene: 126697819

Following gene: 126697821

Centisome position: 7.27

GC content: 30.53

Gene sequence:

>1071_bases
GTGTCCACAGAAATTACAAATGTTAATGCGTTTGACTTAAGTGATATAAGTGAAAGTGATAAGAACGAGAAAATAGAAGG
TGAAGGTTTAAAAAAAGCTGCTGTATTATTAATGACATTAGGGCCAGATGTCTCTAGCGATATAATAAAAAGTTTGCCTG
ATAAACAAGTTCAAAAAATAGGTTTGGAAATTGCAAATATTTCTTCAATAGCTTCTAAAGAAAGAAGAGAAATCTTAAAA
GAGTTTGTAGAAATAAATAGAGCAAAAGATTATGTTATAGAAGGTGGGCTTGAATATGCAAGAGAGTTATTAAGTAATGC
TTTGGGAAATGCTAAAGCAAACAAATTACTTGAAGGTATATCAATAAATACAAGTACAAAGCCTTTTAAACATATTATCA
AACTAGATGTAAAGAAGATATTAGAAATACTTAGGAATGAAAGTGCACAAACTATAGCCGTTTTACTTGCACATATGGAA
CCAGAAAATGGGGCAGAAGTTTTATCATATTTAGACTTTGATTTACAAAATGAAGTAGCTATTAGAATAAGTTCAATGGG
TTCAATATCTCCAGAAGTAATAAAGGTAATTGAAAGTTCATTAGAAGATAAATTACATTCAATAAGTGGTGATGATTTTA
AGGATTATGGAGGAGTGTCTACCTTAGTTCAAATATTGATTAATTCTGATAGAAAAACAGAAAAGAATATCTTGGGAACT
ATTGAAGAACAAAACCCGGATTTAGCAGCTCAAATTAAATCTCATATATTTGTCTTTGAAGATATTGTCAAGTTAGATGA
TATAAGCATACAAAAAGTGTTAAAAGAAGTAACTATGAAAGATTTAGTATATGCCTTAAAAGGTGTGGATGATGCGATTT
CAGATGCTATATATAGAAATCAATCTTCTAGGGCAGCAGAGGCACTTAGAGAAGAAATGGAAATGGTTGGTGTTATAAAG
GTTACACAGGTTGAGGCTGCTCAACAAAAAATAGTAAATAGTGTAAGAAAACTTGAAAGAGAAGGTGCCATAACTATTGT
AAGGAATTTTGGTGATGACTTTGTTGAATAA

Upstream 100 bases:

>100_bases
ACTGACATTAGAGGAAGCTGTTAAAATGTATGCAGAAGAAAAGCCAGACCAAGTGACAGAGATAATAAAAACTTGGTTAA
ATGAGTAAGGGGGATAGAAA

Downstream 100 bases:

>100_bases
TAAGATTATTAAAAGTAAAAAAGCATCATATAAAGGAGTTTTAGATTTATCCATAATAGATAAAGTTAGAGTGGGAGAAT
CAAATCTAAATAAAGAAAAT

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSTEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKIGLEIANISSIASKERREILK
EFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGISINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHME
PENGAEVLSYLDFDLQNEVAIRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGT
IEEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRNQSSRAAEALREEMEMVGVIK
VTQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE

Sequences:

>Translated_356_residues
MSTEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKIGLEIANISSIASKERREILK
EFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGISINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHME
PENGAEVLSYLDFDLQNEVAIRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGT
IEEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRNQSSRAAEALREEMEMVGVIK
VTQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE
>Mature_355_residues
STEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKIGLEIANISSIASKERREILKE
FVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGISINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHMEP
ENGAEVLSYLDFDLQNEVAIRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGTI
EEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRNQSSRAAEALREEMEMVGVIKV
TQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE

Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f

COG id: COG1536

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliG family [H]

Homologues:

Organism=Escherichia coli, GI1788249, Length=321, Percent_Identity=29.9065420560748, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000090
- InterPro:   IPR023087
- InterPro:   IPR011002 [H]

Pfam domain/function: PF01706 FliG_C [H]

EC number: NA

Molecular weight: Translated: 39430; Mature: 39298

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHH
GLEIANISSIASKERREILKEFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCC
SINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHMEPENGAEVLSYLDFDLQNEVA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCE
IRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGT
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHCC
IEEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRN
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
QSSRAAEALREEMEMVGVIKVTQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCC
>Mature Secondary Structure 
STEITNVNAFDLSDISESDKNEKIEGEGLKKAAVLLMTLGPDVSSDIIKSLPDKQVQKI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHH
GLEIANISSIASKERREILKEFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCC
SINTSTKPFKHIIKLDVKKILEILRNESAQTIAVLLAHMEPENGAEVLSYLDFDLQNEVA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCE
IRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGGVSTLVQILINSDRKTEKNILGT
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHCC
IEEQNPDLAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMKDLVYALKGVDDAISDAIYRN
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
QSSRAAEALREEMEMVGVIKVTQVEAAQQKIVNSVRKLEREGAITIVRNFGDDFVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571; 10440379 [H]