Click here to switch to the map view.

The map label for this gene is fliH

Identifier: 126697821

GI number: 126697821

Start: 312979

End: 313710

Strand: Direct

Name: fliH

Synonym: CD0250

Alternate gene names: NA

Gene position: 312979-313710 (Clockwise)

Preceding gene: 126697820

Following gene: 126697822

Centisome position: 7.3

GC content: 26.64

Gene sequence:

>732_bases
TTGAATAATAAGATTATTAAAAGTAAAAAAGCATCATATAAAGGAGTTTTAGATTTATCCATAATAGATAAAGTTAGAGT
GGGAGAATCAAATCTAAATAAAGAAAATGATTGTAGATTTAGGGATGAGGTAATAAAGGAAGCTATAGAATCTGCAGAGA
TAAAAAAGAATGAGATATTAGAAGAAGCAAAAATAAATGCACAAAATATAGAAAAGCAAGCATATGAAAAAGGGTATAGT
CAAGGTCAAAAAAATGGATATGAGGATGGATATAAAGAGTCATATGATGAATATACCCAAAAAGCTAAAGATGAAGCAGA
TTTTATAAAAAATCAGGCAAATTTAATCTTATTACAAGCTAATGAGAAGATGACTGAGTACATAAAAGAAAAAAATAAAG
AGATTGTAAGACTTGCTATTAATATGGCCAGTTCTGTTTTAAAAAAGCATTTCGAAGATGAAGAATCTATGAGTGATTTG
TTAAAGCAAATTATTCAAGATTATGAAGGAAGTAGTTCATTTATAGTAAGATGTAGTTCTTTCTATAAAGATAATATAGA
GAAAGAATTTAAATTATTTAAAGAGGAAACATCACTAAAATCAAGTGTATTTGTTATTGCAGATGATAGTATAGATAAAG
GAAATGCTATTATCCAAAAGGAAAATGGAAGAATAATAGTTGGTATTGATTGTGCTATGGAAAAACTAAAAGAAGAATTG
CTTGGTGAATAA

Upstream 100 bases:

>100_bases
ACACAGGTTGAGGCTGCTCAACAAAAAATAGTAAATAGTGTAAGAAAACTTGAAAGAGAAGGTGCCATAACTATTGTAAG
GAATTTTGGTGATGACTTTG

Downstream 100 bases:

>100_bases
AGTATGTATAAAACTGATATATATATAGATTTTGACAAAATAAATAAGAAAATAGAAAATTTAGAACTCACTATATCAGA
AGGTAGAGTAAAGAAGATAA

Product: flagellar assembly protein

Products: NA

Alternate protein names: Flagellar Assembly Protein; FliH Protein

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNNKIIKSKKASYKGVLDLSIIDKVRVGESNLNKENDCRFRDEVIKEAIESAEIKKNEILEEAKINAQNIEKQAYEKGYS
QGQKNGYEDGYKESYDEYTQKAKDEADFIKNQANLILLQANEKMTEYIKEKNKEIVRLAINMASSVLKKHFEDEESMSDL
LKQIIQDYEGSSSFIVRCSSFYKDNIEKEFKLFKEETSLKSSVFVIADDSIDKGNAIIQKENGRIIVGIDCAMEKLKEEL
LGE

Sequences:

>Translated_243_residues
MNNKIIKSKKASYKGVLDLSIIDKVRVGESNLNKENDCRFRDEVIKEAIESAEIKKNEILEEAKINAQNIEKQAYEKGYS
QGQKNGYEDGYKESYDEYTQKAKDEADFIKNQANLILLQANEKMTEYIKEKNKEIVRLAINMASSVLKKHFEDEESMSDL
LKQIIQDYEGSSSFIVRCSSFYKDNIEKEFKLFKEETSLKSSVFVIADDSIDKGNAIIQKENGRIIVGIDCAMEKLKEEL
LGE
>Mature_243_residues
MNNKIIKSKKASYKGVLDLSIIDKVRVGESNLNKENDCRFRDEVIKEAIESAEIKKNEILEEAKINAQNIEKQAYEKGYS
QGQKNGYEDGYKESYDEYTQKAKDEADFIKNQANLILLQANEKMTEYIKEKNKEIVRLAINMASSVLKKHFEDEESMSDL
LKQIIQDYEGSSSFIVRCSSFYKDNIEKEFKLFKEETSLKSSVFVIADDSIDKGNAIIQKENGRIIVGIDCAMEKLKEEL
LGE

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27902; Mature: 27902

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKIIKSKKASYKGVLDLSIIDKVRVGESNLNKENDCRFRDEVIKEAIESAEIKKNEIL
CCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EEAKINAQNIEKQAYEKGYSQGQKNGYEDGYKESYDEYTQKAKDEADFIKNQANLILLQA
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
NEKMTEYIKEKNKEIVRLAINMASSVLKKHFEDEESMSDLLKQIIQDYEGSSSFIVRCSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHEEEEHH
FYKDNIEKEFKLFKEETSLKSSVFVIADDSIDKGNAIIQKENGRIIVGIDCAMEKLKEEL
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHH
LGE
CCC
>Mature Secondary Structure
MNNKIIKSKKASYKGVLDLSIIDKVRVGESNLNKENDCRFRDEVIKEAIESAEIKKNEIL
CCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EEAKINAQNIEKQAYEKGYSQGQKNGYEDGYKESYDEYTQKAKDEADFIKNQANLILLQA
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
NEKMTEYIKEKNKEIVRLAINMASSVLKKHFEDEESMSDLLKQIIQDYEGSSSFIVRCSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHEEEEHH
FYKDNIEKEFKLFKEETSLKSSVFVIADDSIDKGNAIIQKENGRIIVGIDCAMEKLKEEL
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHH
LGE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA