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The map label for this gene is fliF [H]

Identifier: 126697819

GI number: 126697819

Start: 310353

End: 311903

Strand: Direct

Name: fliF [H]

Synonym: CD0248

Alternate gene names: 126697819

Gene position: 310353-311903 (Clockwise)

Preceding gene: 126697818

Following gene: 126697820

Centisome position: 7.23

GC content: 33.66

Gene sequence:

>1551_bases
ATGATAACCAGTTTTAAAAATAAGATTAAGGAGCAAGTTGCTAAATCTAGGACAAAGATAAGTTCTTTAAAAAAGGGAAC
TAAAATAGCATTAGGTATAGGGGTTATTGCTATATGTTTAGCGCTAGTATTTACAGCAATATCTGCGAGCAAAAATAAGT
ATGCAGTCTTATTTTCAGAACTAGATGCTCAAGATGCTGCAGATATATCAGCAGAGCTAGAGTCTAAAAAGATAGATACT
AAGGTAAAAGGAAGTACGATTTATGTACCTAGAACAGAAGTTGATAAGTTAAGGCTGGAGTTAGCGCCAAGTCTTACAGG
TGGTTCTAAAGGATTTGCACTAATGGATGATAGTTCATCAATAGGGCTTACTGATGAAGAATTTCAGATTAAGAAACAAA
GAATGATACAAGGTGAAATAGAAAAAACAATAAAGAGTTTTCCACAAGTGGAAGACACTAGAGTACATATAACATTTGGA
GAGTCATCAGTATTTGAGAAGGAGGCTGTTCCAGGGAGTGCAGCAGTTTATTTGATGCTAAAACCAGGGACGACTTTAGA
AAAAAACCAAATAAAGTCTGTTATGGCACTTATATCAGGAAGCGTTACAAATATACCAGAGAAAAATGTTCAGGTTATTG
ATAACAAAATGAATTTATTATCTGAAGGTATTTTGGAGGATGAAAATGTTGATGAAAATAATCAACCAATAAATAGTGGC
ATTAGTGTTGATAAAAATAAGGCATCTGAACAAGCATTGAATAAACAACTAGAAAAGTCTATTTTAGAAATGCTAGAACC
GATATTTGGTAAGGGAAAGGTGAAAGCTACAGTAAATGCTGATTTAAGTTTTGATACAGCTGAAAAAACTGAGATAAAAA
TTGACCCTGATAAAGTTGCAATAAAGGAGACAAGGTCGAAAAATTCATCTAAATCTGCTGCAAATAATGTTCAAGGTGTA
GATGCTAACATGAATAACCAAGGAAATAACAATGGTACTAATACAGAAGATAGTTTAGATGAGAGTTTTGAGTATGAAAC
AGGTAAGATTGAAACTCACACTATAGTTGCGCCTGGAGAACTTAATAGATTGACAGCTTCTGTTGCAATAGATGGAAAAA
TAGCTAAAGGTGTTCAAGCTGATGTAGAGGATATTGTTAATAATGCTATAGGTATGGATGGAGCGAGGGGAGATACTCTT
AGCGTTGTTTCAATGGTATTTGACCCAGAAGGTAAGAAAGAGGCTAAACAAGAGCTGGAAGAGATTAAAAAAGAAGGATT
TAAAAAGAACATAATAAAAGCAGTTATTGGAGTAGTAGCAGTAATAGCAGTTGGAGCTATTGGATACTTAATATATAAGA
AAAGAAGTGAACGAGAAGATATGGATTATGAAGATGAAGATTATATTTCTAAATCTGATTCTGTTGATAGGAAAGATAAT
CCTCTATTAGGAGATGACCCAGAACTGACATTAGAGGAAGCTGTTAAAATGTATGCAGAAGAAAAGCCAGACCAAGTGAC
AGAGATAATAAAAACTTGGTTAAATGAGTAA

Upstream 100 bases:

>100_bases
ATCTATGCAATATTTAATAGAAGTTAGAAATAAGATTCATGATGCATATCAAGAAATGAATAAGGTGCAAATTTAGCCTT
TTGAACAGGAGTAATAATCA

Downstream 100 bases:

>100_bases
GGGGGATAGAAAGTGTCCACAGAAATTACAAATGTTAATGCGTTTGACTTAAGTGATATAAGTGAAAGTGATAAGAACGA
GAAAATAGAAGGTGAAGGTT

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MITSFKNKIKEQVAKSRTKISSLKKGTKIALGIGVIAICLALVFTAISASKNKYAVLFSELDAQDAADISAELESKKIDT
KVKGSTIYVPRTEVDKLRLELAPSLTGGSKGFALMDDSSSIGLTDEEFQIKKQRMIQGEIEKTIKSFPQVEDTRVHITFG
ESSVFEKEAVPGSAAVYLMLKPGTTLEKNQIKSVMALISGSVTNIPEKNVQVIDNKMNLLSEGILEDENVDENNQPINSG
ISVDKNKASEQALNKQLEKSILEMLEPIFGKGKVKATVNADLSFDTAEKTEIKIDPDKVAIKETRSKNSSKSAANNVQGV
DANMNNQGNNNGTNTEDSLDESFEYETGKIETHTIVAPGELNRLTASVAIDGKIAKGVQADVEDIVNNAIGMDGARGDTL
SVVSMVFDPEGKKEAKQELEEIKKEGFKKNIIKAVIGVVAVIAVGAIGYLIYKKRSEREDMDYEDEDYISKSDSVDRKDN
PLLGDDPELTLEEAVKMYAEEKPDQVTEIIKTWLNE

Sequences:

>Translated_516_residues
MITSFKNKIKEQVAKSRTKISSLKKGTKIALGIGVIAICLALVFTAISASKNKYAVLFSELDAQDAADISAELESKKIDT
KVKGSTIYVPRTEVDKLRLELAPSLTGGSKGFALMDDSSSIGLTDEEFQIKKQRMIQGEIEKTIKSFPQVEDTRVHITFG
ESSVFEKEAVPGSAAVYLMLKPGTTLEKNQIKSVMALISGSVTNIPEKNVQVIDNKMNLLSEGILEDENVDENNQPINSG
ISVDKNKASEQALNKQLEKSILEMLEPIFGKGKVKATVNADLSFDTAEKTEIKIDPDKVAIKETRSKNSSKSAANNVQGV
DANMNNQGNNNGTNTEDSLDESFEYETGKIETHTIVAPGELNRLTASVAIDGKIAKGVQADVEDIVNNAIGMDGARGDTL
SVVSMVFDPEGKKEAKQELEEIKKEGFKKNIIKAVIGVVAVIAVGAIGYLIYKKRSEREDMDYEDEDYISKSDSVDRKDN
PLLGDDPELTLEEAVKMYAEEKPDQVTEIIKTWLNE
>Mature_516_residues
MITSFKNKIKEQVAKSRTKISSLKKGTKIALGIGVIAICLALVFTAISASKNKYAVLFSELDAQDAADISAELESKKIDT
KVKGSTIYVPRTEVDKLRLELAPSLTGGSKGFALMDDSSSIGLTDEEFQIKKQRMIQGEIEKTIKSFPQVEDTRVHITFG
ESSVFEKEAVPGSAAVYLMLKPGTTLEKNQIKSVMALISGSVTNIPEKNVQVIDNKMNLLSEGILEDENVDENNQPINSG
ISVDKNKASEQALNKQLEKSILEMLEPIFGKGKVKATVNADLSFDTAEKTEIKIDPDKVAIKETRSKNSSKSAANNVQGV
DANMNNQGNNNGTNTEDSLDESFEYETGKIETHTIVAPGELNRLTASVAIDGKIAKGVQADVEDIVNNAIGMDGARGDTL
SVVSMVFDPEGKKEAKQELEEIKKEGFKKNIIKAVIGVVAVIAVGAIGYLIYKKRSEREDMDYEDEDYISKSDSVDRKDN
PLLGDDPELTLEEAVKMYAEEKPDQVTEIIKTWLNE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=563, Percent_Identity=24.866785079929, Blast_Score=147, Evalue=2e-36,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 56383; Mature: 56383

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITSFKNKIKEQVAKSRTKISSLKKGTKIALGIGVIAICLALVFTAISASKNKYAVLFSE
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
LDAQDAADISAELESKKIDTKVKGSTIYVPRTEVDKLRLELAPSLTGGSKGFALMDDSSS
CCCCHHHHHHHHHHHHHCCCEECCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEEECCCC
IGLTDEEFQIKKQRMIQGEIEKTIKSFPQVEDTRVHITFGESSVFEKEAVPGSAAVYLML
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEEE
KPGTTLEKNQIKSVMALISGSVTNIPEKNVQVIDNKMNLLSEGILEDENVDENNQPINSG
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
ISVDKNKASEQALNKQLEKSILEMLEPIFGKGKVKATVNADLSFDTAEKTEIKIDPDKVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEECCCCCCEEEECCCHHH
IKETRSKNSSKSAANNVQGVDANMNNQGNNNGTNTEDSLDESFEYETGKIETHTIVAPGE
HHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCC
LNRLTASVAIDGKIAKGVQADVEDIVNNAIGMDGARGDTLSVVSMVFDPEGKKEAKQELE
CCCEEEEEEECCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
EIKKEGFKKNIIKAVIGVVAVIAVGAIGYLIYKKRSEREDMDYEDEDYISKSDSVDRKDN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCC
PLLGDDPELTLEEAVKMYAEEKPDQVTEIIKTWLNE
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MITSFKNKIKEQVAKSRTKISSLKKGTKIALGIGVIAICLALVFTAISASKNKYAVLFSE
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
LDAQDAADISAELESKKIDTKVKGSTIYVPRTEVDKLRLELAPSLTGGSKGFALMDDSSS
CCCCHHHHHHHHHHHHHCCCEECCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEEECCCC
IGLTDEEFQIKKQRMIQGEIEKTIKSFPQVEDTRVHITFGESSVFEKEAVPGSAAVYLML
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEEE
KPGTTLEKNQIKSVMALISGSVTNIPEKNVQVIDNKMNLLSEGILEDENVDENNQPINSG
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
ISVDKNKASEQALNKQLEKSILEMLEPIFGKGKVKATVNADLSFDTAEKTEIKIDPDKVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEECCCCCCEEEECCCHHH
IKETRSKNSSKSAANNVQGVDANMNNQGNNNGTNTEDSLDESFEYETGKIETHTIVAPGE
HHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCC
LNRLTASVAIDGKIAKGVQADVEDIVNNAIGMDGARGDTLSVVSMVFDPEGKKEAKQELE
CCCEEEEEEECCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
EIKKEGFKKNIIKAVIGVVAVIAVGAIGYLIYKKRSEREDMDYEDEDYISKSDSVDRKDN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCC
PLLGDDPELTLEEAVKMYAEEKPDQVTEIIKTWLNE
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]