| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is frwC [H]
Identifier: 126697778
GI number: 126697778
Start: 270923
End: 271978
Strand: Direct
Name: frwC [H]
Synonym: CD0207
Alternate gene names: 126697778
Gene position: 270923-271978 (Clockwise)
Preceding gene: 126697777
Following gene: 126697779
Centisome position: 6.31
GC content: 34.38
Gene sequence:
>1056_bases ATGAGAATTTTAAAGTTTTTGCAAAAACATCTTATGACAGCAACATCTTATATGATTCCATTTGTGGTTGCAGGAGGAAT ATTATTTGCTTTATCAGTAACTTTAAGTGGACAAGCTGCTGTTCCTGAAACAGGCTGGTTGGCTAAACTGAATCAAATTG GAGCTGCTGGCTTGGCTTTATTCATTCCTATATTAGGTGGATATATAGCATTTAGTATGGCAGATAAACCAGGATTAGCT CCAGGTATGATAGGTGCATATTTAGCAAAAGAAGTAAATGCAGGTTTTATAGGTGGTATCATAGCAGGATTTATAGCAGG ATTTGTTGTTTTACAATTAAAGAAAATTAAATTAGCTCCTACAATGAGAACTTTAGGTTCTATATTTATTTATCCTTTAG TTGGTACATTGATTACAGGTGGTATAATTGTATTTTTAATTGGAGAACCTATAGCTTCTTTTATGACATGGATGACAAAC TGGTTAAATGGAATGTCTGGTGTTTCTAAAATTCCTTTAGGTGGAATCTTAGGAGGAATGATAGCCTCAGATATGGGTGG CCCTATAAATAAGGTTGCTGCTACTTTTGCCCAAACTCAAGTTGACACACTTCCATATTTAATGGGTGGAGTTGGCGTTG CAATTTGTATACCTCCAATTGGTTTAGGATTAGCTACATTATTGTTTCCAAAAAAATTTAGCAAGGAAGAAAGAGATTCA GGTAAAGCTTCACTATTAATGGGATGTGTTGGAATTACAGAAGGAGCTATTCCATTTGCAACATCAGATCCAGTTAGAGT AATACCTTGTATTATGGCTGGGTCGATTGTAGGAAATATTATGGCTTTTTTATTAGGATGTTTAAATCATGCACCCTGGG GAGGTCTGATAGTGTTACCTGTAGTTGACAATAGGTTGGGGTATATTGCATCAGTATTAACTGGAGCAGTAGTTGTTGCG GTATTAATGAAATTAGTAAAAAAAGACGTGAAAGAAGATGAAGAAATTGAAGAAGATTTAGATGAATCAATTGAATTAAT ATTTGAAGAATTATAA
Upstream 100 bases:
>100_bases CGTTTATTGATGCATGAAAGTTTTAGAAATCAAATTAGATGTTCAGATGAACAAACTGTTTATAATCTTATAAAAGAAAA AATAGAGGAGGAAGATTAAA
Downstream 100 bases:
>100_bases ATATAAATGGAAGGAATTTGTATAAAAAAGTAAATATAAAACTATAAATTTAAAGGAGATAAGAATATGAAAATTGTAGC AGTAACATCTTGTCCTAGTG
Product: fructose-like permease EIIC subunit 2
Products: NA
Alternate protein names: PTS system fructose-like EIIC component 2 [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MRILKFLQKHLMTATSYMIPFVVAGGILFALSVTLSGQAAVPETGWLAKLNQIGAAGLALFIPILGGYIAFSMADKPGLA PGMIGAYLAKEVNAGFIGGIIAGFIAGFVVLQLKKIKLAPTMRTLGSIFIYPLVGTLITGGIIVFLIGEPIASFMTWMTN WLNGMSGVSKIPLGGILGGMIASDMGGPINKVAATFAQTQVDTLPYLMGGVGVAICIPPIGLGLATLLFPKKFSKEERDS GKASLLMGCVGITEGAIPFATSDPVRVIPCIMAGSIVGNIMAFLLGCLNHAPWGGLIVLPVVDNRLGYIASVLTGAVVVA VLMKLVKKDVKEDEEIEEDLDESIELIFEEL
Sequences:
>Translated_351_residues MRILKFLQKHLMTATSYMIPFVVAGGILFALSVTLSGQAAVPETGWLAKLNQIGAAGLALFIPILGGYIAFSMADKPGLA PGMIGAYLAKEVNAGFIGGIIAGFIAGFVVLQLKKIKLAPTMRTLGSIFIYPLVGTLITGGIIVFLIGEPIASFMTWMTN WLNGMSGVSKIPLGGILGGMIASDMGGPINKVAATFAQTQVDTLPYLMGGVGVAICIPPIGLGLATLLFPKKFSKEERDS GKASLLMGCVGITEGAIPFATSDPVRVIPCIMAGSIVGNIMAFLLGCLNHAPWGGLIVLPVVDNRLGYIASVLTGAVVVA VLMKLVKKDVKEDEEIEEDLDESIELIFEEL >Mature_351_residues MRILKFLQKHLMTATSYMIPFVVAGGILFALSVTLSGQAAVPETGWLAKLNQIGAAGLALFIPILGGYIAFSMADKPGLA PGMIGAYLAKEVNAGFIGGIIAGFIAGFVVLQLKKIKLAPTMRTLGSIFIYPLVGTLITGGIIVFLIGEPIASFMTWMTN WLNGMSGVSKIPLGGILGGMIASDMGGPINKVAATFAQTQVDTLPYLMGGVGVAICIPPIGLGLATLLFPKKFSKEERDS GKASLLMGCVGITEGAIPFATSDPVRVIPCIMAGSIVGNIMAFLLGCLNHAPWGGLIVLPVVDNRLGYIASVLTGAVVVA VLMKLVKKDVKEDEEIEEDLDESIELIFEEL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790386, Length=313, Percent_Identity=52.7156549520767, Blast_Score=300, Evalue=9e-83, Organism=Escherichia coli, GI1788492, Length=327, Percent_Identity=43.1192660550459, Blast_Score=244, Evalue=4e-66, Organism=Escherichia coli, GI1786951, Length=346, Percent_Identity=32.3699421965318, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI87082348, Length=293, Percent_Identity=33.1058020477816, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1788729, Length=379, Percent_Identity=27.4406332453826, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013014 - InterPro: IPR006327 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36771; Mature: 36771
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILKFLQKHLMTATSYMIPFVVAGGILFALSVTLSGQAAVPETGWLAKLNQIGAAGLAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH FIPILGGYIAFSMADKPGLAPGMIGAYLAKEVNAGFIGGIIAGFIAGFVVLQLKKIKLAP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH TMRTLGSIFIYPLVGTLITGGIIVFLIGEPIASFMTWMTNWLNGMSGVSKIPLGGILGGM HHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH IASDMGGPINKVAATFAQTQVDTLPYLMGGVGVAICIPPIGLGLATLLFPKKFSKEERDS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCHHHHCC GKASLLMGCVGITEGAIPFATSDPVRVIPCIMAGSIVGNIMAFLLGCLNHAPWGGLIVLP CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VVDNRLGYIASVLTGAVVVAVLMKLVKKDVKEDEEIEEDLDESIELIFEEL ECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRILKFLQKHLMTATSYMIPFVVAGGILFALSVTLSGQAAVPETGWLAKLNQIGAAGLAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH FIPILGGYIAFSMADKPGLAPGMIGAYLAKEVNAGFIGGIIAGFIAGFVVLQLKKIKLAP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH TMRTLGSIFIYPLVGTLITGGIIVFLIGEPIASFMTWMTNWLNGMSGVSKIPLGGILGGM HHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH IASDMGGPINKVAATFAQTQVDTLPYLMGGVGVAICIPPIGLGLATLLFPKKFSKEERDS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCHHHHCC GKASLLMGCVGITEGAIPFATSDPVRVIPCIMAGSIVGNIMAFLLGCLNHAPWGGLIVLP CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VVDNRLGYIASVLTGAVVVAVLMKLVKKDVKEDEEIEEDLDESIELIFEEL ECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]