| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697772
Identifier: 126697772
GI number: 126697772
Start: 260537
End: 261058
Strand: Direct
Name: 126697772
Synonym: CD0201
Alternate gene names: NA
Gene position: 260537-261058 (Clockwise)
Preceding gene: 126697770
Following gene: 126697775
Centisome position: 6.07
GC content: 30.65
Gene sequence:
>522_bases TTGTTTAGTATTGGTGGTGGTTATGCAATCATACTTTTAATCCAAGAGAAAGTAGTAAATCAAACTGGATGGATAAGTGA GAAAATGTTTACAGATATTATAACTATTTCACAAATGACACCAGGGCCACTGGCTGTTAATACTTCTACTTTTGTTGGAC TTCAAATTGGAGGGTTTTGGGGAGCAGTTGCAGCCACTTTAGGTTGTGTATTATGTGGTGTAGTAATATCTCTATTTTTA TATAATTTTTTTCAAAAGCATCAGAACTCTACTTATATATTTGAAATATTAAATGGTCTAAAATCAGCTTCATTAGGTTT AATTATCTCAGCTGCGGCTACAATTATAATCCTTGCATTATTTGGGACGAATAAAGTGTACTTCAATTCTATATTTGAGA TGCTAAACTGGACTGCACTAATAATCTTTTTTGTTACACTACTGATAGTACGTAAGTGGAAAATTAATCCTATTGTGATT ATAATAATAAGTGGTATACTGGGAATATTTTTTTATTTATAA
Upstream 100 bases:
>100_bases GGTTTGAAAGAGATAATACACTGTCCAAAGTATTGCGAATGGCACTTCCTTGCTCACGTAACAATAACGGAAACGTGCAT AACTGTCGTAGAGATAAGGC
Downstream 100 bases:
>100_bases GTTTTTGGTAAGTAGAGGATATCTATTTTTTTATATCTTAAATCCAAATAGCCAATAAAGTAAGGCCATTTGGATTTTTA ATAAATTCTGAAAAGATAAT
Product: chromate transporter
Products: NA
Alternate protein names: Chromate Transporter Protein; Hromate Transport Membrane Protein; CHR Family Chromate Ion Efflux Pump; Chromate Transport Protein ChrA; Chromate Exporter
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MFSIGGGYAIILLIQEKVVNQTGWISEKMFTDIITISQMTPGPLAVNTSTFVGLQIGGFWGAVAATLGCVLCGVVISLFL YNFFQKHQNSTYIFEILNGLKSASLGLIISAAATIIILALFGTNKVYFNSIFEMLNWTALIIFFVTLLIVRKWKINPIVI IIISGILGIFFYL
Sequences:
>Translated_173_residues MFSIGGGYAIILLIQEKVVNQTGWISEKMFTDIITISQMTPGPLAVNTSTFVGLQIGGFWGAVAATLGCVLCGVVISLFL YNFFQKHQNSTYIFEILNGLKSASLGLIISAAATIIILALFGTNKVYFNSIFEMLNWTALIIFFVTLLIVRKWKINPIVI IIISGILGIFFYL >Mature_173_residues MFSIGGGYAIILLIQEKVVNQTGWISEKMFTDIITISQMTPGPLAVNTSTFVGLQIGGFWGAVAATLGCVLCGVVISLFL YNFFQKHQNSTYIFEILNGLKSASLGLIISAAATIIILALFGTNKVYFNSIFEMLNWTALIIFFVTLLIVRKWKINPIVI IIISGILGIFFYL
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19027; Mature: 19027
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIGGGYAIILLIQEKVVNQTGWISEKMFTDIITISQMTPGPLAVNTSTFVGLQIGGFW CCCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECHHH GAVAATLGCVLCGVVISLFLYNFFQKHQNSTYIFEILNGLKSASLGLIISAAATIIILAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTNKVYFNSIFEMLNWTALIIFFVTLLIVRKWKINPIVIIIISGILGIFFYL HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MFSIGGGYAIILLIQEKVVNQTGWISEKMFTDIITISQMTPGPLAVNTSTFVGLQIGGFW CCCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECHHH GAVAATLGCVLCGVVISLFLYNFFQKHQNSTYIFEILNGLKSASLGLIISAAATIIILAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTNKVYFNSIFEMLNWTALIIFFVTLLIVRKWKINPIVIIIISGILGIFFYL HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA