Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is cooS [H]

Identifier: 126697747

GI number: 126697747

Start: 230672

End: 232573

Strand: Direct

Name: cooS [H]

Synonym: CD0174

Alternate gene names: 126697747

Gene position: 230672-232573 (Clockwise)

Preceding gene: 126697746

Following gene: 126697748

Centisome position: 5.38

GC content: 33.6

Gene sequence:

>1902_bases
ATGGCTTGTAACACTTGTAAAATGTGCGAAAGTGCAGACAAGAAATTAGAAAGTTTTGTAGCTTCAAAGGATGTTGAAAC
AGCATTTCATAGAACAGAAGATCAGAAAGTTAAGTGTGGTTTTGGACTTCAGGGGGTTTGTTGTAGACTCTGTTCAAATG
GACCATGTAGAGTAACTCCTAAATCACCAAGAGGTATATGTGGAGCAGATGCAGACACTATAGTAGCAAGAAACTTTTTA
AGAGCAGTAGCATCAGGAGCAGCTTGTTATTTACATGTGGTAGAAAATACAGCTAAGAATTTAAAAAATGTTGGAATAAC
TAAAGGTGTTGTTAAAGGAGAAAAAACATTAAATCAATTAGCAGAGATGTTTGGAATAGAAAGTGATGAAAAGTATGATA
AATGTATAAAGGTTGCAGACAAAGTTATCAACGATTTGTATAAATCAAGAGATGATAAAATGGAATTAGTAGAAAAAATA
GCTTATGCACCTAGAGTGAAAAAGTGGAAAGAGTTAGGTATAATGCCTGGTGGTGCAAAGTCAGAAGTTTTTGATGCAAT
AGTAAAATCATCAACAAATTTAAATAGTGACCCAGTAGACATGCTAGTTAATTGTTTGAACTTAGGTATATCAACAGGAT
TATATGGTCTTACACTAACTAATCTTTTAAATGATGTTATGTTGGGAGAACCAGTTATAAGAATGGCTCCTGTAGGATTT
AATGTAATAGACCCAGACTACATAAATATAATGATAACAGGCCATCAACATTCAACATTTGCAAATTTCCAAGATAGATT
AAAAGATGAAGATGTTATAAAATTAGCTCAATCTGTTGGTGCAAAAGGATTTAAGCTAGTAGGATGTACATGTGTTGGTC
AAGATTTACAATTAAGAGGAGAACATTATCAAGAAGTATTTGCTGGACATGCAGGTAACAATTTTACAAGTGAGGCTGTT
TTATCAACTGGAGCAATAGATATAGTTCTTTCAGAATTTAACTGTACTATACCAGGGCTTGAACCAATAGCAGATAAATA
TAAAGTAAAAATGGTTTGTTTAGATGATGTTGCTAAAAAAGCGAATGCAGAATACATAGGTTTAGACAGAAGTAAATTAG
ATGAACTTAGTAACACTTTAATAGAAAAAGCATTGGAGTCTTATAAGGAGAGAAGAGGAAGTATTGAAATAGATATACCA
AAAGACCATGGATTTGAACAATCTTTAACTGGTGTAAGTGAAAAGAACCTGAAAGCGTTTTTAGGAGATTCATGGAAACC
TCTTATTAATTTAATTGCAGAAGGAAAAATTAAAGGTGTTGCAGCTGTTGTAGGATGTTCAAATATGACAGCAGGAGGAC
ATGATGTAAATACTGTTGAACTTACTAAAGAATTGATTAAAAAAGATATAATAGTACTATCTGCAGGATGTTCTACTGGA
GGATTAGAAAATGTTGGTCTTATGTCACCTGGAGCAGAAGAATTAGCAGGAGAAAACTTAAAAGAAGTATGTAAGACTTT
AGGAATACCACCAGTATTAAACTTTGGACCATGTCTAGCTATAGGAAGACTAGAAATAGTAGCAACAGAATTAGCAGCTG
AACTTGGAATTGACCTACCACAATTACCATTAGTGCTTTCAGCTCCACAATGGTTGGAAGAACAAGCATTAGCTGATGGA
GCGTTTGGTCTTGCCCTTGGCTTACCTCTTCATTTAGCTTTACCTCCATTTATAACAGGAGGAAAATTGGTGACAGAAGT
ATTAACAGAAAAATTAAAAGACTTAACAGGAGGACATGTTATAGTGAATCCAGACCCTAAATCTTCAGCTAATCAATTAG
AAGAAATAATAATAGATAGAAGAAAAAATTTAGGGTTAAAGGATGTGGAATGCAATGCATAG

Upstream 100 bases:

>100_bases
TGGTATTAAATAAGTAGATTTTAATAGTTAAATTATAGTCAATTATAATAAAGCTATTTAATCTACTTTTTTAATATAAA
AATATAAGGGGGAATTTGTA

Downstream 100 bases:

>100_bases
AATTTTTATAAATAAAGATTTATGTACAGGATGTAAGAGCTGTGTACTAGCATGTATGCTAAAACACAATAAAGATTATG
ACATGTACACTCTTGATTTA

Product: oxidoreductase, acetyl-CoA synthase subunit

Products: NA

Alternate protein names: CODH [H]

Number of amino acids: Translated: 633; Mature: 632

Protein sequence:

>633_residues
MACNTCKMCESADKKLESFVASKDVETAFHRTEDQKVKCGFGLQGVCCRLCSNGPCRVTPKSPRGICGADADTIVARNFL
RAVASGAACYLHVVENTAKNLKNVGITKGVVKGEKTLNQLAEMFGIESDEKYDKCIKVADKVINDLYKSRDDKMELVEKI
AYAPRVKKWKELGIMPGGAKSEVFDAIVKSSTNLNSDPVDMLVNCLNLGISTGLYGLTLTNLLNDVMLGEPVIRMAPVGF
NVIDPDYINIMITGHQHSTFANFQDRLKDEDVIKLAQSVGAKGFKLVGCTCVGQDLQLRGEHYQEVFAGHAGNNFTSEAV
LSTGAIDIVLSEFNCTIPGLEPIADKYKVKMVCLDDVAKKANAEYIGLDRSKLDELSNTLIEKALESYKERRGSIEIDIP
KDHGFEQSLTGVSEKNLKAFLGDSWKPLINLIAEGKIKGVAAVVGCSNMTAGGHDVNTVELTKELIKKDIIVLSAGCSTG
GLENVGLMSPGAEELAGENLKEVCKTLGIPPVLNFGPCLAIGRLEIVATELAAELGIDLPQLPLVLSAPQWLEEQALADG
AFGLALGLPLHLALPPFITGGKLVTEVLTEKLKDLTGGHVIVNPDPKSSANQLEEIIIDRRKNLGLKDVECNA

Sequences:

>Translated_633_residues
MACNTCKMCESADKKLESFVASKDVETAFHRTEDQKVKCGFGLQGVCCRLCSNGPCRVTPKSPRGICGADADTIVARNFL
RAVASGAACYLHVVENTAKNLKNVGITKGVVKGEKTLNQLAEMFGIESDEKYDKCIKVADKVINDLYKSRDDKMELVEKI
AYAPRVKKWKELGIMPGGAKSEVFDAIVKSSTNLNSDPVDMLVNCLNLGISTGLYGLTLTNLLNDVMLGEPVIRMAPVGF
NVIDPDYINIMITGHQHSTFANFQDRLKDEDVIKLAQSVGAKGFKLVGCTCVGQDLQLRGEHYQEVFAGHAGNNFTSEAV
LSTGAIDIVLSEFNCTIPGLEPIADKYKVKMVCLDDVAKKANAEYIGLDRSKLDELSNTLIEKALESYKERRGSIEIDIP
KDHGFEQSLTGVSEKNLKAFLGDSWKPLINLIAEGKIKGVAAVVGCSNMTAGGHDVNTVELTKELIKKDIIVLSAGCSTG
GLENVGLMSPGAEELAGENLKEVCKTLGIPPVLNFGPCLAIGRLEIVATELAAELGIDLPQLPLVLSAPQWLEEQALADG
AFGLALGLPLHLALPPFITGGKLVTEVLTEKLKDLTGGHVIVNPDPKSSANQLEEIIIDRRKNLGLKDVECNA
>Mature_632_residues
ACNTCKMCESADKKLESFVASKDVETAFHRTEDQKVKCGFGLQGVCCRLCSNGPCRVTPKSPRGICGADADTIVARNFLR
AVASGAACYLHVVENTAKNLKNVGITKGVVKGEKTLNQLAEMFGIESDEKYDKCIKVADKVINDLYKSRDDKMELVEKIA
YAPRVKKWKELGIMPGGAKSEVFDAIVKSSTNLNSDPVDMLVNCLNLGISTGLYGLTLTNLLNDVMLGEPVIRMAPVGFN
VIDPDYINIMITGHQHSTFANFQDRLKDEDVIKLAQSVGAKGFKLVGCTCVGQDLQLRGEHYQEVFAGHAGNNFTSEAVL
STGAIDIVLSEFNCTIPGLEPIADKYKVKMVCLDDVAKKANAEYIGLDRSKLDELSNTLIEKALESYKERRGSIEIDIPK
DHGFEQSLTGVSEKNLKAFLGDSWKPLINLIAEGKIKGVAAVVGCSNMTAGGHDVNTVELTKELIKKDIIVLSAGCSTGG
LENVGLMSPGAEELAGENLKEVCKTLGIPPVLNFGPCLAIGRLEIVATELAAELGIDLPQLPLVLSAPQWLEEQALADGA
FGLALGLPLHLALPPFITGGKLVTEVLTEKLKDLTGGHVIVNPDPKSSANQLEEIIIDRRKNLGLKDVECNA

Specific function: Unknown

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 68144; Mature: 68013

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACNTCKMCESADKKLESFVASKDVETAFHRTEDQKVKCGFGLQGVCCRLCSNGPCRVTP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCEEECC
KSPRGICGADADTIVARNFLRAVASGAACYLHVVENTAKNLKNVGITKGVVKGEKTLNQL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AEMFGIESDEKYDKCIKVADKVINDLYKSRDDKMELVEKIAYAPRVKKWKELGIMPGGAK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCH
SEVFDAIVKSSTNLNSDPVDMLVNCLNLGISTGLYGLTLTNLLNDVMLGEPVIRMAPVGF
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCCC
NVIDPDYINIMITGHQHSTFANFQDRLKDEDVIKLAQSVGAKGFKLVGCTCVGQDLQLRG
CCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEECCCHHHCH
EHYQEVFAGHAGNNFTSEAVLSTGAIDIVLSEFNCTIPGLEPIADKYKVKMVCLDDVAKK
HHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCEEEEEEHHHHHHH
ANAEYIGLDRSKLDELSNTLIEKALESYKERRGSIEIDIPKDHGFEQSLTGVSEKNLKAF
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCHHHHHHH
LGDSWKPLINLIAEGKIKGVAAVVGCSNMTAGGHDVNTVELTKELIKKDIIVLSAGCSTG
HCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCC
GLENVGLMSPGAEELAGENLKEVCKTLGIPPVLNFGPCLAIGRLEIVATELAAELGIDLP
CCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
QLPLVLSAPQWLEEQALADGAFGLALGLPLHLALPPFITGGKLVTEVLTEKLKDLTGGHV
CCCCEECCHHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
IVNPDPKSSANQLEEIIIDRRKNLGLKDVECNA
EECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ACNTCKMCESADKKLESFVASKDVETAFHRTEDQKVKCGFGLQGVCCRLCSNGPCRVTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCEEECC
KSPRGICGADADTIVARNFLRAVASGAACYLHVVENTAKNLKNVGITKGVVKGEKTLNQL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AEMFGIESDEKYDKCIKVADKVINDLYKSRDDKMELVEKIAYAPRVKKWKELGIMPGGAK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCH
SEVFDAIVKSSTNLNSDPVDMLVNCLNLGISTGLYGLTLTNLLNDVMLGEPVIRMAPVGF
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCCC
NVIDPDYINIMITGHQHSTFANFQDRLKDEDVIKLAQSVGAKGFKLVGCTCVGQDLQLRG
CCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEECCCHHHCH
EHYQEVFAGHAGNNFTSEAVLSTGAIDIVLSEFNCTIPGLEPIADKYKVKMVCLDDVAKK
HHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCEEEEEEHHHHHHH
ANAEYIGLDRSKLDELSNTLIEKALESYKERRGSIEIDIPKDHGFEQSLTGVSEKNLKAF
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCHHHHHHH
LGDSWKPLINLIAEGKIKGVAAVVGCSNMTAGGHDVNTVELTKELIKKDIIVLSAGCSTG
HCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCC
GLENVGLMSPGAEELAGENLKEVCKTLGIPPVLNFGPCLAIGRLEIVATELAAELGIDLP
CCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
QLPLVLSAPQWLEEQALADGAFGLALGLPLHLALPPFITGGKLVTEVLTEKLKDLTGGHV
CCCCEECCHHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
IVNPDPKSSANQLEEIIIDRRKNLGLKDVECNA
EECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 11841199 [H]