| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is glmM [H]
Identifier: 126697691
GI number: 126697691
Start: 161710
End: 163116
Strand: Direct
Name: glmM [H]
Synonym: CD0119
Alternate gene names: 126697691
Gene position: 161710-163116 (Clockwise)
Preceding gene: 126697690
Following gene: 126697692
Centisome position: 3.77
GC content: 31.77
Gene sequence:
>1407_bases ATGAACTATAAAAATATAATACAAATTACAAGCTTTTCAATTATGAAAGGAGAATCTTTAGTGAGAAAGTATTTTGGAAC AGATGGAGTTAGAGGAGTAGCAAATACAGAACTAACATGTGATTTAGCATATAAACTTGGTAGAGCTGGTGGATTTGTCT TAGCTCAAGGAGACCACAGAGTAAAAGTAGTAGTAGGTAAGGATACTAGAATATCAGGTGATATGTTGGAAGCATCTTTA ATAGCAGGACTTATGTCTGTTGGATGTGATGTTATTACTGTTGGAATAATACCAACACCTGCAGTGGCATATTTAACTAG AAAATATGGTGCTGATTGTGGTGTGGTTATATCTGCATCTCACAATCCTGTTGAATATAATGGAATCAAATTCTTTAATA AGAATGGATATAAATTAGATGATGAAATTGAATTGAAAATAGAAGAATATATAGACGATATAGACAAAATTGATTGTCTT CCAATTGGTGAAAATGTAGGAAGAAAATTACATGAACATTGTGCACAAAGAGACTATGTAGACTACCTAAAATCAATAAT AAGCACTGACTTTAAGGGATTAAAAGTAGTTTTGGACTGTGCTAATGGTGCGTCATATAAAGTGGCACCAATAGTGTTTG ATGAACTAGGAGCAAGTGTAATTTCAATAAATAGTTCACCAGATGGAAATAATATAAACTATAAATGTGGCTCTACACAT CCAGAACAACTTCAAAGGGCTGTTTTGGAACATAATGCTGACTTAGGTCTTGCATATGATGGAGATGCTGATAGATTAAT TGCAGTAAATGAAAAGGGTCAAATTGTTGATGGAGACCATATAATGATATTGAGTGCCTTAAATTTAAAGAAAAATAATA AATTGGCACAAGATACTTTGGTAGTTACAGTTATGAGTAATATAGGGTTGACAATAGCTGCTAAGGAAAATGGAATAAAT TTATCTACTACAGCAGTTGGAGACAGATATGTTTTAGAAGATATGGTTAAAAATGGATATAATCTTGGTGGAGAGCAATC TGGACATATGATATTTTTAGATTACAACACTACTGGAGATGGAGTGCTTAGTTCTCTAATACTTGCAAATATAATCTTGC AAGAAAAGAAACCTTTATCAGAAATTGCATCAATAATGAGCCAATACCCACAAGTATTAGTAAATGCAACAATAAAAAAT GAAAATAAGAACAAATATATGGAATATCCAGAAATAAAAACTGAGATAGAAAGAATAGAATCTATTTTAGACGGAAATGG TAGAGTTTTGATAAGACCATCAGGAACTGAGCCATTAGTTAGAGTTATGTTAGAGGGTAAAGAGGAAGGTCAAATAAAAG AATTAGCAACAAACTTAGCTAATCTTATACAAGAAAAATTATCGTAA
Upstream 100 bases:
>100_bases AGATGTCAAAAAAAAGACAATAGAATTATTTCTATTGTCTTTTTTGCTGATAAGTATTAAAATATTTTTATGACTGAAAT TAAGCCTATAATGATATTTT
Downstream 100 bases:
>100_bases TTTAAAGGGTATTCTCAGATATAAATACTGAGGACACCTTTCTAAGCGCCAGAACTTAGTTATAGACATAATTATTGAGT AATATAGGAACTAAGTTGAC
Product: phosphoglucomutase/phosphomannomutase mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNYKNIIQITSFSIMKGESLVRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHRVKVVVGKDTRISGDMLEASL IAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCL PIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTH PEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTLVVTVMSNIGLTIAAKENGIN LSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKN ENKNKYMEYPEIKTEIERIESILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS
Sequences:
>Translated_468_residues MNYKNIIQITSFSIMKGESLVRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHRVKVVVGKDTRISGDMLEASL IAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCL PIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTH PEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTLVVTVMSNIGLTIAAKENGIN LSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKN ENKNKYMEYPEIKTEIERIESILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS >Mature_468_residues MNYKNIIQITSFSIMKGESLVRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHRVKVVVGKDTRISGDMLEASL IAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCL PIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTH PEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTLVVTVMSNIGLTIAAKENGIN LSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKN ENKNKYMEYPEIKTEIERIESILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=44.8430493273543, Blast_Score=348, Evalue=6e-97, Organism=Escherichia coli, GI1788361, Length=457, Percent_Identity=29.3216630196937, Blast_Score=162, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6323752, Length=410, Percent_Identity=24.8780487804878, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 51126; Mature: 51126
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKNIIQITSFSIMKGESLVRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHR CCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHCCCCCEEEECCCCE VKVVVGKDTRISGDMLEASLIAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISAS EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECC HNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCLPIGENVGRKLHEHCAQRDYV CCCEEECCEEEECCCCCCCCCHHEEEHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCHHH DYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTH HHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEHHHHCCEEEEECCCCCCCCEEEEECCCC PEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTL HHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCEECCCCEEEEEEECCCCCCCHHHHHE VVTVMSNIGLTIAAKENGINLSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGD EEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCH GVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKNENKNKYMEYPEIKTEIERIE HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH SILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS HHHCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNYKNIIQITSFSIMKGESLVRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHR CCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHCCCCCEEEECCCCE VKVVVGKDTRISGDMLEASLIAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISAS EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECC HNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCLPIGENVGRKLHEHCAQRDYV CCCEEECCEEEECCCCCCCCCHHEEEHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCHHH DYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTH HHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEHHHHCCEEEEECCCCCCCCEEEEECCCC PEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTL HHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCEECCCCEEEEEEECCCCCCCHHHHHE VVTVMSNIGLTIAAKENGINLSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGD EEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCH GVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKNENKNKYMEYPEIKTEIERIE HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH SILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS HHHCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA