Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697586

Identifier: 126697586

GI number: 126697586

Start: 34145

End: 34558

Strand: Direct

Name: 126697586

Synonym: CD0020

Alternate gene names: NA

Gene position: 34145-34558 (Clockwise)

Preceding gene: 126697584

Following gene: 126697587

Centisome position: 0.8

GC content: 27.54

Gene sequence:

>414_bases
TTGTATATAGTAATAGGAAATGAAATAGTTGATAGTGAAGAACTTAAAATAATTATAGATAAAAATAGTGAATTTAAAGT
TGAAAAAGATTTAAGTAAAAGCACAAAAAGAGAAGATGTAATAGCATATCAGTTAAGTATAGATTTAAATTACCTAGATT
CTCTTATAAATGAGCAATGTAATTTAGCCAGTCTATCTGATGAAGAGAAATTTGATGAATATATGACTTTGTCTGATGAA
CTTGCACTGGATTTAGAAGAGTTAATGCCAAAATATACAATAATAAATGCTAGAGCATATAAATTAGACGAGGTATATGG
AATTGTAAAAATAATACTAGCTGTAGCGTATGCAGATTTAGGGCACTTAAAACTTTCTGATGTAGTAAAGAGGCTATCTA
GACAAGTAGATTAG

Upstream 100 bases:

>100_bases
GGTTCGAGCCCTGTTAATCCCACCAGTGCAAACCTCTAGTAAAACTACTAGAGGTTTTATTTTTGATTGAAAAAATTTTT
ATATTTAGGAGGTAAAAAAT

Downstream 100 bases:

>100_bases
GATATGAATATGAACTATATTAAAAAAATGTATAAAATCTTACGTAAAGATGAAAATAATTATGTAAACATAGAAAAAAA
CAGTATAAAATCAAGTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MYIVIGNEIVDSEELKIIIDKNSEFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLINEQCNLASLSDEEKFDEYMTLSDE
LALDLEELMPKYTIINARAYKLDEVYGIVKIILAVAYADLGHLKLSDVVKRLSRQVD

Sequences:

>Translated_137_residues
MYIVIGNEIVDSEELKIIIDKNSEFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLINEQCNLASLSDEEKFDEYMTLSDE
LALDLEELMPKYTIINARAYKLDEVYGIVKIILAVAYADLGHLKLSDVVKRLSRQVD
>Mature_137_residues
MYIVIGNEIVDSEELKIIIDKNSEFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLINEQCNLASLSDEEKFDEYMTLSDE
LALDLEELMPKYTIINARAYKLDEVYGIVKIILAVAYADLGHLKLSDVVKRLSRQVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15726; Mature: 15726

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIVIGNEIVDSEELKIIIDKNSEFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLINEQC
CEEEECCCEECCCCEEEEEECCCCEEEHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCC
NLASLSDEEKFDEYMTLSDELALDLEELMPKYTIINARAYKLDEVYGIVKIILAVAYADL
CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCC
GHLKLSDVVKRLSRQVD
CCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MYIVIGNEIVDSEELKIIIDKNSEFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLINEQC
CEEEECCCEECCCCEEEEEECCCCEEEHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCC
NLASLSDEEKFDEYMTLSDELALDLEELMPKYTIINARAYKLDEVYGIVKIILAVAYADL
CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCC
GHLKLSDVVKRLSRQVD
CCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA