| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697232
Identifier: 126697232
GI number: 126697232
Start: 1624293
End: 1625375
Strand: Direct
Name: 126697232
Synonym: P9301_18941
Alternate gene names: NA
Gene position: 1624293-1625375 (Clockwise)
Preceding gene: 126697230
Following gene: 126697234
Centisome position: 98.93
GC content: 27.89
Gene sequence:
>1083_bases ATGAAAAGCTTAAAAGAAAATTTTCAAAAAGCAAACATAGTTATTATTGGAGCCGGGATTATTGGAAAATTTAACGCTTT AGAATTATCAGAATTAGGTTTCCAGGTAACGATAATAGATCCAACTCAACTCAAAAATAGTAGCAATGCAGCTTTGGGTT TGCTAATGGGTAATATGTATCAAAAAAGAAGGGGGAGAAGCTGGAATCTCAGGAAACAAAGCATTGAATTATGGCCACAA TGGATTAAGTTCCTACAAAAATTTAATTATGAATTAAATATCGAAAAACCATTAATACAACTAACTACTAATGAAGAAAA GTTTAAAAAATTAGAGAAATTTGTTTTTGAAAATAATGATCCAACGTTATTAATTCTAGAAAGAGACTCAATATTAATCA AGAATATAAATAAAGCCTTCCAAACAAAAAATATAAAAGGAATAATCTCCTTCAAAGATGGAAGAATAAATGCTTTATCG TTACTTCAAACATTAGATAAATATCTAAAACATAAAAAAGTAAATTATTTACAAGGAGAAATAATAAAAATAAGAAAATC AAACAATCAATGGATTTCTACAACAAGGAATAATGAAAATATCAAATCTGACATGGTTATTTTATGTAATTCACTAAAAG CGATTGACTTAATAGATAGCCGATCTCACAACATCAAATTAAAGCCTGTTTTAGGTCAAGCTATAGAAATTGAGATTAAT GATGCAGAAGTTGATTTGTTATCGCTGCCAAAACAATTCAATATAAATGGTAAAAATATAATTTCAAAATCAAAAAATAA GCTAATTATTGGATCAACTGACGAATATAGTACTAAGCCAGAAAAAAATACATTTGAAAAACTCACAAATTTTCTCGATA AAAAACCAAATTGGCTAGAGAAAGGAAAAATTTCTAAAAAGTGGTACGGAATTAGGTCAAGACCAGATGGTGAACCTTCA CCAATAATGAAAAATCTTGAAGATGGGCTAATTATATGTACAGGTTTTTATAAAAATGGGTTTTTATTGGCTCCCGCTTG TTCTAAATGGGTTGCTAATGAAATTAAAAATTACCTTTACTAA
Upstream 100 bases:
>100_bases AGGCCAGGACGATCGGGACAGACAATTTTGAATATAATTGAAGGATGTTCCAAAAATCTTTAACTATTAAGTCAAATAAG CAAGCATATCTAATATATCA
Downstream 100 bases:
>100_bases TCTTTTGTTTCAGTGAAGTCTGCATCAATTACATCATCTCCACCTTTTTCATTTGAATCACTCTCATCAGGACCGCCTGC TGCACCAGGTGATGGTGCCT
Product: NAD binding site:D-amino acid oxidase
Products: NA
Alternate protein names: Glycine/D-Amino Acid Oxidases; FAD Dependent Oxidoreductase
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKSLKENFQKANIVIIGAGIIGKFNALELSELGFQVTIIDPTQLKNSSNAALGLLMGNMYQKRRGRSWNLRKQSIELWPQ WIKFLQKFNYELNIEKPLIQLTTNEEKFKKLEKFVFENNDPTLLILERDSILIKNINKAFQTKNIKGIISFKDGRINALS LLQTLDKYLKHKKVNYLQGEIIKIRKSNNQWISTTRNNENIKSDMVILCNSLKAIDLIDSRSHNIKLKPVLGQAIEIEIN DAEVDLLSLPKQFNINGKNIISKSKNKLIIGSTDEYSTKPEKNTFEKLTNFLDKKPNWLEKGKISKKWYGIRSRPDGEPS PIMKNLEDGLIICTGFYKNGFLLAPACSKWVANEIKNYLY
Sequences:
>Translated_360_residues MKSLKENFQKANIVIIGAGIIGKFNALELSELGFQVTIIDPTQLKNSSNAALGLLMGNMYQKRRGRSWNLRKQSIELWPQ WIKFLQKFNYELNIEKPLIQLTTNEEKFKKLEKFVFENNDPTLLILERDSILIKNINKAFQTKNIKGIISFKDGRINALS LLQTLDKYLKHKKVNYLQGEIIKIRKSNNQWISTTRNNENIKSDMVILCNSLKAIDLIDSRSHNIKLKPVLGQAIEIEIN DAEVDLLSLPKQFNINGKNIISKSKNKLIIGSTDEYSTKPEKNTFEKLTNFLDKKPNWLEKGKISKKWYGIRSRPDGEPS PIMKNLEDGLIICTGFYKNGFLLAPACSKWVANEIKNYLY >Mature_360_residues MKSLKENFQKANIVIIGAGIIGKFNALELSELGFQVTIIDPTQLKNSSNAALGLLMGNMYQKRRGRSWNLRKQSIELWPQ WIKFLQKFNYELNIEKPLIQLTTNEEKFKKLEKFVFENNDPTLLILERDSILIKNINKAFQTKNIKGIISFKDGRINALS LLQTLDKYLKHKKVNYLQGEIIKIRKSNNQWISTTRNNENIKSDMVILCNSLKAIDLIDSRSHNIKLKPVLGQAIEIEIN DAEVDLLSLPKQFNINGKNIISKSKNKLIIGSTDEYSTKPEKNTFEKLTNFLDKKPNWLEKGKISKKWYGIRSRPDGEPS PIMKNLEDGLIICTGFYKNGFLLAPACSKWVANEIKNYLY
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41440; Mature: 41440
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLKENFQKANIVIIGAGIIGKFNALELSELGFQVTIIDPTQLKNSSNAALGLLMGNMY CCCHHHHHHHCCEEEEECCCCCCCCCEEHHHCCEEEEEECHHHCCCCCCCCHHHHHHHHH QKRRGRSWNLRKQSIELWPQWIKFLQKFNYELNIEKPLIQLTTNEEKFKKLEKFVFENND HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCHHHHHHHHHHHCCCCC PTLLILERDSILIKNINKAFQTKNIKGIISFKDGRINALSLLQTLDKYLKHKKVNYLQGE CEEEEEECCCEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCE IIKIRKSNNQWISTTRNNENIKSDMVILCNSLKAIDLIDSRSHNIKLKPVLGQAIEIEIN EEEEEECCCCEEEECCCCCCCHHCHHEEECCCCEEEEECCCCCCEEEEEECCCEEEEEEC DAEVDLLSLPKQFNINGKNIISKSKNKLIIGSTDEYSTKPEKNTFEKLTNFLDKKPNWLE CCEEEHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHH KGKISKKWYGIRSRPDGEPSPIMKNLEDGLIICTGFYKNGFLLAPACSKWVANEIKNYLY CCCCCHHEECCCCCCCCCCCHHHHCCCCCEEEEEEECCCCEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure MKSLKENFQKANIVIIGAGIIGKFNALELSELGFQVTIIDPTQLKNSSNAALGLLMGNMY CCCHHHHHHHCCEEEEECCCCCCCCCEEHHHCCEEEEEECHHHCCCCCCCCHHHHHHHHH QKRRGRSWNLRKQSIELWPQWIKFLQKFNYELNIEKPLIQLTTNEEKFKKLEKFVFENND HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCHHHHHHHHHHHCCCCC PTLLILERDSILIKNINKAFQTKNIKGIISFKDGRINALSLLQTLDKYLKHKKVNYLQGE CEEEEEECCCEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCE IIKIRKSNNQWISTTRNNENIKSDMVILCNSLKAIDLIDSRSHNIKLKPVLGQAIEIEIN EEEEEECCCCEEEECCCCCCCHHCHHEEECCCCEEEEECCCCCCEEEEEECCCEEEEEEC DAEVDLLSLPKQFNINGKNIISKSKNKLIIGSTDEYSTKPEKNTFEKLTNFLDKKPNWLE CCEEEHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHH KGKISKKWYGIRSRPDGEPSPIMKNLEDGLIICTGFYKNGFLLAPACSKWVANEIKNYLY CCCCCHHEECCCCCCCCCCCHHHHCCCCCEEEEEEECCCCEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA