| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is eriC [H]
Identifier: 126697230
GI number: 126697230
Start: 1622022
End: 1623380
Strand: Direct
Name: eriC [H]
Synonym: P9301_18921
Alternate gene names: 126697230
Gene position: 1622022-1623380 (Clockwise)
Preceding gene: 126697229
Following gene: 126697232
Centisome position: 98.79
GC content: 34.29
Gene sequence:
>1359_bases ATGCCAAACTTTATAAAAGATAATATTCAAAAAACAAGTAATAATTCTTCTCGTAGCATCAAAAAATTATTAAAACAAAG ATCTCTAGTCGTTGCATTATCGCTCTTATTAACAGGTCTAGGGGCTTCAATTACAAGCATATCTTTTAAAACTGGAATCT ATTTTTTTAATAATTGGAGATTAGCATTATTAGACCAATTCTCATCTATTGCGGTCTTACCTATTTTTGGAGCTCTTGGG GGAGCTATTGCAGGATATTTGATCAAAAATATAGCACCTGCCGCAAAAGGTTCAGGTGTGAGTCAAATCATGGGTTTCTT AAGACATAAAAAAGTTCCAATGAATTTAAAAGTAGGATTAGTAAAGCTCATATCAGGAATTATTGCGATTGGTAGCGGAT TCCCTTTGGGTCCAGAAGGTCCATCAGTTCAAATGGGAGGATCAGTAGCTTGGCAAATGGCCAAGTGGCTCAAAGCTCCT ACAGCTTTTAGAAGAGTAATAGTAGCAGCAGGTGGTGGTGCTGGGATAGCTGCAGTATTTAGCGCTCCATTAGGAGGGTT TATCTATGCAATAGAGGAGTTATTAAACTCTGCTAGACCAGTAATTTTATTATTAGTAGTAATTACAACTTTTATTGCAG ATTCGTCTGCTGATATTATTCAAGCATTGGGTTTAGATCCTAAAGCAGGAGGCTTTGATTTTAACCTCGGATTTTTGATT CAAAAAGAATATGACCCATCAGTTTTTTTCTTACCTGTAGATTTTATTTACTTAGTTTTATTAGGAATAATTATTGGAAT ATTTGCAGAATTGTACAGCAGATATGTTTTGTTAATGCAAAATCTTGGTAAAAAGTGGTACAAAAATAAATTTGTTTTAA AAATGAGTATCTGTGGATTTATTTTAGGAAGTATCTACTCTTTTTTACCCAGTACATTTCATAATTTAGATGAATTACAG AAAATAATAGCTGAACAAAATACAAGTATTGGAATTGCTTTATTAGCAGTTTTAGTGCTATTTATCACAACAGGTTTAGC TGCAGCATCCGGAGCTCCTGGAGGATTATTCTACCCAATGCTTACTTTAGGAGGATCAATCGGACTAATAATGGGGAGCT GGGTAGAAATTGCTACAGGACATGCACCGAGTACATACATTTTTGCGGGAATGGGAGCTTTCGTAGCAGGATGTTCTCGA ACGCCAATAACAGCAATGTTTTTAGCTTTTGCTTTAACAAAAAATTTATTAATAATGAAACCTGTGTTAATCAGCTGCAT TGCCAGTTTCTTGGTAGCAAGAGCTTTTAATGAAGAATCAATTTATGAAAGACAAATACAAATAGAATTAGAAGACTAA
Upstream 100 bases:
>100_bases TATTACTAAAAATAAAATTAATCCATATTCAGATGAACTTTATCGCTATCTTCAATTTGATGAAATACACGATTTCAGCT TGACAAAGTAATCATGGACC
Downstream 100 bases:
>100_bases AAAACTATTTTCAATCAAAAACAGCAGTTTTGCTGTTATAGACAAATACTTGATGATTTAAGTGTAATCTAACTGCTCTT GCTAAAGCTATTCTTTCAAT
Product: putative chloride channel
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MPNFIKDNIQKTSNNSSRSIKKLLKQRSLVVALSLLLTGLGASITSISFKTGIYFFNNWRLALLDQFSSIAVLPIFGALG GAIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGLVKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAP TAFRRVIVAAGGGAGIAAVFSAPLGGFIYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLI QKEYDPSVFFLPVDFIYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGFILGSIYSFLPSTFHNLDELQ KIIAEQNTSIGIALLAVLVLFITTGLAAASGAPGGLFYPMLTLGGSIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSR TPITAMFLAFALTKNLLIMKPVLISCIASFLVARAFNEESIYERQIQIELED
Sequences:
>Translated_452_residues MPNFIKDNIQKTSNNSSRSIKKLLKQRSLVVALSLLLTGLGASITSISFKTGIYFFNNWRLALLDQFSSIAVLPIFGALG GAIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGLVKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAP TAFRRVIVAAGGGAGIAAVFSAPLGGFIYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLI QKEYDPSVFFLPVDFIYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGFILGSIYSFLPSTFHNLDELQ KIIAEQNTSIGIALLAVLVLFITTGLAAASGAPGGLFYPMLTLGGSIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSR TPITAMFLAFALTKNLLIMKPVLISCIASFLVARAFNEESIYERQIQIELED >Mature_451_residues PNFIKDNIQKTSNNSSRSIKKLLKQRSLVVALSLLLTGLGASITSISFKTGIYFFNNWRLALLDQFSSIAVLPIFGALGG AIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGLVKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAPT AFRRVIVAAGGGAGIAAVFSAPLGGFIYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLIQ KEYDPSVFFLPVDFIYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGFILGSIYSFLPSTFHNLDELQK IIAEQNTSIGIALLAVLVLFITTGLAAASGAPGGLFYPMLTLGGSIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSRT PITAMFLAFALTKNLLIMKPVLISCIASFLVARAFNEESIYERQIQIELED
Specific function: Proton-coupled chloride transporter. Functions as antiport system and exchanges two chloride ions for 1 proton. Probably acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation, as part of the extreme
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786350, Length=401, Percent_Identity=31.1720698254364, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71985148, Length=303, Percent_Identity=27.0627062706271, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71985141, Length=303, Percent_Identity=27.0627062706271, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322500, Length=408, Percent_Identity=24.5098039215686, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI161078208, Length=400, Percent_Identity=23.5, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI281361606, Length=400, Percent_Identity=23.5, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI28573073, Length=400, Percent_Identity=23.5, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI281361608, Length=400, Percent_Identity=23.5, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI28573075, Length=400, Percent_Identity=23.5, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI28573071, Length=400, Percent_Identity=23.5, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 48385; Mature: 48254
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFIKDNIQKTSNNSSRSIKKLLKQRSLVVALSLLLTGLGASITSISFKTGIYFFNNWR CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHCCCEEEEECCH LALLDQFSSIAVLPIFGALGGAIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH VKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAPTAFRRVIVAAGGGAGIAAVF HHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCHHHHHHHHEECCCCCHHHHHH SAPLGGFIYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLI HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEE QKEYDPSVFFLPVDFIYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGF EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH ILGSIYSFLPSTFHNLDELQKIIAEQNTSIGIALLAVLVLFITTGLAAASGAPGGLFYPM HHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LTLGGSIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSRTPITAMFLAFALTKNLLIMK HHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH PVLISCIASFLVARAFNEESIYERQIQIELED HHHHHHHHHHHHHHHCCHHHHEEEEEEEEECC >Mature Secondary Structure PNFIKDNIQKTSNNSSRSIKKLLKQRSLVVALSLLLTGLGASITSISFKTGIYFFNNWR CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHCCCEEEEECCH LALLDQFSSIAVLPIFGALGGAIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH VKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAPTAFRRVIVAAGGGAGIAAVF HHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCHHHHHHHHEECCCCCHHHHHH SAPLGGFIYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLI HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEE QKEYDPSVFFLPVDFIYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGF EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH ILGSIYSFLPSTFHNLDELQKIIAEQNTSIGIALLAVLVLFITTGLAAASGAPGGLFYPM HHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LTLGGSIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSRTPITAMFLAFALTKNLLIMK HHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH PVLISCIASFLVARAFNEESIYERQIQIELED HHHHHHHHHHHHHHHCCHHHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA