| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697206
Identifier: 126697206
GI number: 126697206
Start: 1594801
End: 1595328
Strand: Reverse
Name: 126697206
Synonym: P9301_18681
Alternate gene names: NA
Gene position: 1595328-1594801 (Counterclockwise)
Preceding gene: 126697210
Following gene: 126697205
Centisome position: 97.16
GC content: 27.08
Gene sequence:
>528_bases ATGCCGGTAATTCCTCTTTTACCCTTATTCCATAGATTCAATAGCCAATATTTTGAAAATTCTTTAACGGTTAATAATCA CCCTTTAGTAAAAGTTAGATGGAGTGATAATAGATTAAAAACTACTGCTGGTTTTTATAAAAGAAAACGTATTAATGGTT TTATAGATTCTGAAATTATCTTATCGAAACCTATCTTGAGTAAATTATCCACTAGTGAAATAAATAGTACTTTGTGTCAT GAAATGATTCATGCATGGGTAGATAGGATATTAAAGAAAAATGAGATACATGGTCCAAATTTCCTAGAAAAGATGAATCA AATTAATGAGAAAGAGAAGAATTTTCAAATTTCTGTAAGGCACTCATTTCCTATAGAAAGGAGAGAATTAAAATATATAG GAACTTGTCAAAATTGTGGTGAGAAATTTTTTTATAGAAAAAGAATAAAGAATATAGCCTGTAAAAAATGTTGTGTAAAT TTCTTTAATGGATCATGGAATAAAAAGTGTTTAATTTTGTTTGATTAG
Upstream 100 bases:
>100_bases TAGTGTTGCATCCATGTTAATTTAAGTTTTTTATTACTTTAAGAAAAGAAATCGTTTTTGATGGCTTTTTTTGTCAAAAT AATACTAATTTTAATCCATA
Downstream 100 bases:
>100_bases AAATAATTAGATGTGTTTTTGTTTCTATCTTTGGAATTATTTATTTTTTTAATGTAATTTATATTTTAAAAAGAACAATA ATTTATGGATTCAAGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPVIPLLPLFHRFNSQYFENSLTVNNHPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEIILSKPILSKLSTSEINSTLCH EMIHAWVDRILKKNEIHGPNFLEKMNQINEKEKNFQISVRHSFPIERRELKYIGTCQNCGEKFFYRKRIKNIACKKCCVN FFNGSWNKKCLILFD
Sequences:
>Translated_175_residues MPVIPLLPLFHRFNSQYFENSLTVNNHPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEIILSKPILSKLSTSEINSTLCH EMIHAWVDRILKKNEIHGPNFLEKMNQINEKEKNFQISVRHSFPIERRELKYIGTCQNCGEKFFYRKRIKNIACKKCCVN FFNGSWNKKCLILFD >Mature_174_residues PVIPLLPLFHRFNSQYFENSLTVNNHPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEIILSKPILSKLSTSEINSTLCHE MIHAWVDRILKKNEIHGPNFLEKMNQINEKEKNFQISVRHSFPIERRELKYIGTCQNCGEKFFYRKRIKNIACKKCCVNF FNGSWNKKCLILFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20770; Mature: 20638
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIPLLPLFHRFNSQYFENSLTVNNHPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEII CCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCCHHH LSKPILSKLSTSEINSTLCHEMIHAWVDRILKKNEIHGPNFLEKMNQINEKEKNFQISVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEE HSFPIERRELKYIGTCQNCGEKFFYRKRIKNIACKKCCVNFFNGSWNKKCLILFD ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure PVIPLLPLFHRFNSQYFENSLTVNNHPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEII CCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCCHHH LSKPILSKLSTSEINSTLCHEMIHAWVDRILKKNEIHGPNFLEKMNQINEKEKNFQISVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEE HSFPIERRELKYIGTCQNCGEKFFYRKRIKNIACKKCCVNFFNGSWNKKCLILFD ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA