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The map label for this gene is 126697205

Identifier: 126697205

GI number: 126697205

Start: 1594153

End: 1594716

Strand: Reverse

Name: 126697205

Synonym: P9301_18671

Alternate gene names: NA

Gene position: 1594716-1594153 (Counterclockwise)

Preceding gene: 126697206

Following gene: 126697199

Centisome position: 97.13

GC content: 31.56

Gene sequence:

>564_bases
ATGGATTCAAGGAAAATTAGAAATCTTAGAAATAGTTTTGATAGAAATATTGTTGATAAACAAGTTGATAAAATTTTTGA
AACTGGAAGACAATTCGTTGATGGAGTATCTGGTGCTAGGCCAGGTAAAAGAAGGAACTCAGATTTTCAAGGAATAACAA
GTAAGAGTGTTAAAAGAGTAGGAAGATGGGTATCTGAAAAAGTGGATTTATTTTTTGATGAAGAAAATGATGATTGGAAT
GATGAGAATTTTTACGATGATCAAGGCGATATTAAGACATTTTCAAGAGATTCAAATTCTTATGAATCATCTACACAGCA
TTCAAAAAGACCTTTAGAAGCAATATCTTTAAGGCAACCAAAAAATTTAAAGACAACTGACCAAAAAAAATTACCTTATG
TGAAAGAGAGTAAGGACGAAGATTGGCCAGATGAAATGGATTTCAAAGTTGAAAGATGGCAAAGAGCTTCAGAAAATGAG
AATAATACTTCGAGAGATCCATCAATTCAACAAGTTCAATCAAAATCAAGAAATCTTCCCAGATCAAGAAGAAGAAGAGT
ATAG

Upstream 100 bases:

>100_bases
AATTTTGTTTGATTAGAAATAATTAGATGTGTTTTTGTTTCTATCTTTGGAATTATTTATTTTTTTAATGTAATTTATAT
TTTAAAAAGAACAATAATTT

Downstream 100 bases:

>100_bases
TTTTGTAAATTCTTTAATTCCTGAATAGCCTAATAAAGTTTCTAAATGTGGATTGAAGACTTCTCTGATAATTGTTAAGG
GTTTTTTGTCTCGGAAAAAT

Product: viral RNA helicase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDSRKIRNLRNSFDRNIVDKQVDKIFETGRQFVDGVSGARPGKRRNSDFQGITSKSVKRVGRWVSEKVDLFFDEENDDWN
DENFYDDQGDIKTFSRDSNSYESSTQHSKRPLEAISLRQPKNLKTTDQKKLPYVKESKDEDWPDEMDFKVERWQRASENE
NNTSRDPSIQQVQSKSRNLPRSRRRRV

Sequences:

>Translated_187_residues
MDSRKIRNLRNSFDRNIVDKQVDKIFETGRQFVDGVSGARPGKRRNSDFQGITSKSVKRVGRWVSEKVDLFFDEENDDWN
DENFYDDQGDIKTFSRDSNSYESSTQHSKRPLEAISLRQPKNLKTTDQKKLPYVKESKDEDWPDEMDFKVERWQRASENE
NNTSRDPSIQQVQSKSRNLPRSRRRRV
>Mature_187_residues
MDSRKIRNLRNSFDRNIVDKQVDKIFETGRQFVDGVSGARPGKRRNSDFQGITSKSVKRVGRWVSEKVDLFFDEENDDWN
DENFYDDQGDIKTFSRDSNSYESSTQHSKRPLEAISLRQPKNLKTTDQKKLPYVKESKDEDWPDEMDFKVERWQRASENE
NNTSRDPSIQQVQSKSRNLPRSRRRRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22183; Mature: 22183

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRKIRNLRNSFDRNIVDKQVDKIFETGRQFVDGVSGARPGKRRNSDFQGITSKSVKRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
GRWVSEKVDLFFDEENDDWNDENFYDDQGDIKTFSRDSNSYESSTQHSKRPLEAISLRQP
HHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCHHHHHCCCC
KNLKTTDQKKLPYVKESKDEDWPDEMDFKVERWQRASENENNTSRDPSIQQVQSKSRNLP
CCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
RSRRRRV
HHHHCCC
>Mature Secondary Structure
MDSRKIRNLRNSFDRNIVDKQVDKIFETGRQFVDGVSGARPGKRRNSDFQGITSKSVKRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
GRWVSEKVDLFFDEENDDWNDENFYDDQGDIKTFSRDSNSYESSTQHSKRPLEAISLRQP
HHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCHHHHHCCCC
KNLKTTDQKKLPYVKESKDEDWPDEMDFKVERWQRASENENNTSRDPSIQQVQSKSRNLP
CCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
RSRRRRV
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA