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The map label for this gene is ydjX [C]

Identifier: 126697210

GI number: 126697210

Start: 1597445

End: 1598041

Strand: Reverse

Name: ydjX [C]

Synonym: P9301_18721

Alternate gene names: 126697210

Gene position: 1598041-1597445 (Counterclockwise)

Preceding gene: 126697211

Following gene: 126697206

Centisome position: 97.33

GC content: 27.3

Gene sequence:

>597_bases
ATGAATATATTTCTTGAAAATATTTATAATTTATCTTTTTTTTTTAATACTGGCTTTGGGATCTTTTCGTTTGCTTGTAT
TTATATTTTTACTGTTTTATTAATACTTCCAGCCTCTTGGTTATCTTTATTATCAGGTTTTTTATATGGCTCATATTTAG
GATCAATTATCGTTTTCATTTCCGCTTTCATAGGAGCATCAGTTGCTTTTTTTGTATCAAAGAGTTTTTTTGCAAAAAAG
CTAAAAAATCTTTTTAGCCGTTATCCAAAATTAAGTGTCATGGAAAAAGTAGTAGAAAAAGGCGGACTTAAATTAATTTT
TTTAGCGAGATTATCTCCGATATTTCCCTTCAGTATTCTTAATTATTTTTATGGCTTGAATAATATTAAATTTAGAGATT
TTGCTCTTGGTCTTCTTGGAATAATTCCAGGAACTGTTCTTTATTGCTCAATAGGCAGTTTGGCAAAAAGTATTCAGGAG
TTAAAAAATGTGCAATCACCAAATAATTTATATATTACCAGCATTGGAATTATTTCAACTTTCTTAGTTGTATATTTTTC
AGCTCAATACTCAAGAGAATATTTTGAAAAATCTTGA

Upstream 100 bases:

>100_bases
AGGCTCCAAAAGATATTGTTGACGAATGCAGATTTAAATTAAATGAGGGTTCTGTACAAAAGGAAAGAATTACAAAAAAA
CTCGAACTTTTGAATTGAGA

Downstream 100 bases:

>100_bases
GAATTTACTCTTTAATACTCCAATCTCTAATTGATGCAATTAAGACAAACCACAAAAGCCTCAATTTACCTAGTAAAGTT
TTGTTGGCTTCTAATTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNIFLENIYNLSFFFNTGFGIFSFACIYIFTVLLILPASWLSLLSGFLYGSYLGSIIVFISAFIGASVAFFVSKSFFAKK
LKNLFSRYPKLSVMEKVVEKGGLKLIFLARLSPIFPFSILNYFYGLNNIKFRDFALGLLGIIPGTVLYCSIGSLAKSIQE
LKNVQSPNNLYITSIGIISTFLVVYFSAQYSREYFEKS

Sequences:

>Translated_198_residues
MNIFLENIYNLSFFFNTGFGIFSFACIYIFTVLLILPASWLSLLSGFLYGSYLGSIIVFISAFIGASVAFFVSKSFFAKK
LKNLFSRYPKLSVMEKVVEKGGLKLIFLARLSPIFPFSILNYFYGLNNIKFRDFALGLLGIIPGTVLYCSIGSLAKSIQE
LKNVQSPNNLYITSIGIISTFLVVYFSAQYSREYFEKS
>Mature_198_residues
MNIFLENIYNLSFFFNTGFGIFSFACIYIFTVLLILPASWLSLLSGFLYGSYLGSIIVFISAFIGASVAFFVSKSFFAKK
LKNLFSRYPKLSVMEKVVEKGGLKLIFLARLSPIFPFSILNYFYGLNNIKFRDFALGLLGIIPGTVLYCSIGSLAKSIQE
LKNVQSPNNLYITSIGIISTFLVVYFSAQYSREYFEKS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Homo sapiens, GI223555958, Length=168, Percent_Identity=27.3809523809524, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI87081964, Length=136, Percent_Identity=30.8823529411765, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22326; Mature: 22326

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFLENIYNLSFFFNTGFGIFSFACIYIFTVLLILPASWLSLLSGFLYGSYLGSIIVFI
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFIGASVAFFVSKSFFAKKLKNLFSRYPKLSVMEKVVEKGGLKLIFLARLSPIFPFSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCHHHHH
NYFYGLNNIKFRDFALGLLGIIPGTVLYCSIGSLAKSIQELKNVQSPNNLYITSIGIIST
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH
FLVVYFSAQYSREYFEKS
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIFLENIYNLSFFFNTGFGIFSFACIYIFTVLLILPASWLSLLSGFLYGSYLGSIIVFI
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFIGASVAFFVSKSFFAKKLKNLFSRYPKLSVMEKVVEKGGLKLIFLARLSPIFPFSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCHHHHH
NYFYGLNNIKFRDFALGLLGIIPGTVLYCSIGSLAKSIQELKNVQSPNNLYITSIGIIST
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH
FLVVYFSAQYSREYFEKS
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]