| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697199
Identifier: 126697199
GI number: 126697199
Start: 1587939
End: 1588637
Strand: Reverse
Name: 126697199
Synonym: P9301_18611
Alternate gene names: NA
Gene position: 1588637-1587939 (Counterclockwise)
Preceding gene: 126697205
Following gene: 126697198
Centisome position: 96.76
GC content: 37.48
Gene sequence:
>699_bases GTGAGTCTCGGATATCGCGATAAATTATCTAGAGGTCGAAGGGCTATGGCTCATTTGATACACCTCTGGCATGAAAGAAA TGGATGGTCTCACAGAGTATTGCCATTACTTTCTGAAGTTCTTGATTTAGGTAAAGTTCATAATTCGCAAATTTCTAATC TTAGGAATGGTAAGTTATCTTCGCCAGGTCCTGAAGTTTTTCTTGCTTTGGCTCAAGTTAATACGATTCTTGATCAAGGT ATAGAAAAAATCAGGGATCGTTTTGAATGTGATTACCCAGAGTTATGGAAATCTTTGGAAGAGTCTGCAGTACCCTTAAA AAATGATTCTGGTAATCCATTATCGGCCGGTGAGTTATTCGAGATATTTTCAGGATTAAAACCTCTACCTTCATCTTTTG ATTGGTACATAGAAGATGAAGAAGCCTCTGCTTTAAGTGATGCTCTTTCAGTGCATTTTTGTCAGAATAAGGCTTGGAGA TCATGTAAAATGCAGGTAATGGAAGCCTATGCTGTCAATAAATCTGCCCGTAGAGAGCGTTTTGCTGAGGTAATTGCAGG AATTAGAGATTATACGGCAGAAGAATTAGATGGAGAACTTCTTGATTTATATGAGGCTTCAAAAAAACTTTCTTATTTTC AGGGCAGGGGACCTAATGCTTTCCTCGTAGAATTAAGAAATTTAGCTTCTGAAAAATAA
Upstream 100 bases:
>100_bases TTTCTTGGAAAATTACTGAATTCATGATATTGAAATACTATTTTCAAAATTACCGATATGTAATATTATCATACTATACT ATTGATAAGTTTAATTATCT
Downstream 100 bases:
>100_bases CATTAAATTTCATAATAAATGACTCTTGACAATAACTTAAAACTGGCTGAAAACGCTGTTCTTTCTGTCGAAGAGAGTTT AAGTAAAGTTTTCCAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSLGYRDKLSRGRRAMAHLIHLWHERNGWSHRVLPLLSEVLDLGKVHNSQISNLRNGKLSSPGPEVFLALAQVNTILDQG IEKIRDRFECDYPELWKSLEESAVPLKNDSGNPLSAGELFEIFSGLKPLPSSFDWYIEDEEASALSDALSVHFCQNKAWR SCKMQVMEAYAVNKSARRERFAEVIAGIRDYTAEELDGELLDLYEASKKLSYFQGRGPNAFLVELRNLASEK
Sequences:
>Translated_232_residues MSLGYRDKLSRGRRAMAHLIHLWHERNGWSHRVLPLLSEVLDLGKVHNSQISNLRNGKLSSPGPEVFLALAQVNTILDQG IEKIRDRFECDYPELWKSLEESAVPLKNDSGNPLSAGELFEIFSGLKPLPSSFDWYIEDEEASALSDALSVHFCQNKAWR SCKMQVMEAYAVNKSARRERFAEVIAGIRDYTAEELDGELLDLYEASKKLSYFQGRGPNAFLVELRNLASEK >Mature_231_residues SLGYRDKLSRGRRAMAHLIHLWHERNGWSHRVLPLLSEVLDLGKVHNSQISNLRNGKLSSPGPEVFLALAQVNTILDQGI EKIRDRFECDYPELWKSLEESAVPLKNDSGNPLSAGELFEIFSGLKPLPSSFDWYIEDEEASALSDALSVHFCQNKAWRS CKMQVMEAYAVNKSARRERFAEVIAGIRDYTAEELDGELLDLYEASKKLSYFQGRGPNAFLVELRNLASEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26329; Mature: 26198
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGYRDKLSRGRRAMAHLIHLWHERNGWSHRVLPLLSEVLDLGKVHNSQISNLRNGKLS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SPGPEVFLALAQVNTILDQGIEKIRDRFECDYPELWKSLEESAVPLKNDSGNPLSAGELF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH EIFSGLKPLPSSFDWYIEDEEASALSDALSVHFCQNKAWRSCKMQVMEAYAVNKSARRER HHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH FAEVIAGIRDYTAEELDGELLDLYEASKKLSYFQGRGPNAFLVELRNLASEK HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SLGYRDKLSRGRRAMAHLIHLWHERNGWSHRVLPLLSEVLDLGKVHNSQISNLRNGKLS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SPGPEVFLALAQVNTILDQGIEKIRDRFECDYPELWKSLEESAVPLKNDSGNPLSAGELF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH EIFSGLKPLPSSFDWYIEDEEASALSDALSVHFCQNKAWRSCKMQVMEAYAVNKSARRER HHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH FAEVIAGIRDYTAEELDGELLDLYEASKKLSYFQGRGPNAFLVELRNLASEK HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA